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Jesse RR Zaneveld
Jesse RR Zaneveld
Associate Professor, Division of Biological Sciences, University of Washington, Bothell
Verified email at uw.edu
Title
Cited by
Cited by
Year
QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335-336, 2010
351622010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
152012019
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ...
Nature biotechnology 31 (9), 814-821, 2013
86012013
PICRUSt2 for prediction of metagenome functions
GM Douglas, VJ Maffei, JR Zaneveld, SN Yurgel, JR Brown, CM Taylor, ...
Nature biotechnology 38 (6), 685-688, 2020
3885*2020
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature, 2017
22762017
Normalization and microbial differential abundance strategies depend upon data characteristics
S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ...
Microbiome 5, 1-18, 2017
18412017
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
N Fierer, CL Lauber, KS Ramirez, J Zaneveld, MA Bradford, R Knight
The ISME journal 6 (5), 1007-1017, 2012
17062012
Best practices for analysing microbiomes
R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ...
Nature Reviews Microbiology 16 (7), 410-422, 2018
15062018
Bayesian community-wide culture-independent microbial source tracking
D Knights, J Kuczynski, ES Charlson, J Zaneveld, MC Mozer, RG Collman, ...
Nature methods 8 (9), 761-763, 2011
14922011
Stress and stability: applying the Anna Karenina principle to animal microbiomes
JR Zaneveld, R McMinds, R Vega Thurber
Nature Microbiology, 2017
7712017
Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales
JR Zaneveld, DE Burkepile, AA Shantz, CE Pritchard, R McMinds, ...
Nature communications 7 (1), 1-12, 2016
5282016
Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching
RL Vega Thurber, DE Burkepile, C Fuchs, AA Shantz, R McMinds, ...
Global change biology 20 (2), 544-554, 2014
5242014
Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
FJ Pollock, R McMinds, S Smith, DG Bourne, BL Willis, M Medina, ...
Nature communications 9 (1), 4921, 2018
3052018
Normalization and microbial differential abundance strategies depend upon data characteristics. Microbiome 5: 27
S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ...
3052017
Natural volcanic CO2 seeps reveal future trajectories for host–microbial associations in corals and sponges
KM Morrow, DG Bourne, C Humphrey, ES Botté, P Laffy, J Zaneveld, ...
The ISME journal 9 (4), 894-908, 2015
2722015
Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii, studied in twins
EE Hansen, CA Lozupone, FE Rey, M Wu, JL Guruge, A Narra, ...
Proceedings of the National Academy of Sciences 108 (supplement_1), 4599-4606, 2011
2592011
Direct sequencing of the human microbiome readily reveals community differences
J Kuczynski, EK Costello, DR Nemergut, J Zaneveld, CL Lauber, ...
Genome biology 11, 1-9, 2010
1982010
Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts
C Lozupone, K Faust, J Raes, JJ Faith, DN Frank, J Zaneveld, JI Gordon, ...
Genome Research, 2012
1932012
One health relationships between human, animal, and environmental microbiomes: a mini-review
P Trinh, JR Zaneveld, S Safranek, PM Rabinowitz
Frontiers in public health 6, 235, 2018
1902018
Human-associated microbial signatures: examining their predictive value
D Knights, LW Parfrey, J Zaneveld, C Lozupone, R Knight
Cell host & microbe 10 (4), 292-296, 2011
1722011
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