| Cameo: a python library for computer aided metabolic engineering and optimization of cell factories JGR Cardoso, K Jensen, C Lieven, AS Lærke Hansen, S Galkina, ... ACS synthetic biology 7 (4), 1163-1166, 2018 | 66 | 2018 |
| Analysis of genetic variation and potential applications in genome-scale metabolic modeling JGR Cardoso, MR Andersen, MJ Herrgård, N Sonnenschein Frontiers in bioengineering and biotechnology 3, 13, 2015 | 41 | 2015 |
| Optlang: An algebraic modeling language for mathematical optimization. K Jensen, JGR Cardoso, N Sonnenschein J. Open Source Softw. 2 (9), 139, 2017 | 31 | 2017 |
| Analysis of Pseudomonas putida growth on non‐trivial carbon sources using transcriptomics and genome‐scale modelling I D'Arrigo, JGR Cardoso, M Rennig, N Sonnenschein, MJ Herrgård, ... Environmental microbiology reports 11 (2), 87-97, 2019 | 23 | 2019 |
| Genome-wide semi-automated annotation of transporter systems O Dias, D Gomes, P Vilaça, J Cardoso, M Rocha, EC Ferreira, I Rocha IEEE/ACM transactions on computational biology and bioinformatics 14 (2 …, 2016 | 20 | 2016 |
| MARSI: metabolite analogues for rational strain improvement JGR Cardoso, AA Zeidan, K Jensen, N Sonnenschein, AR Neves, ... Bioinformatics 34 (13), 2319-2321, 2018 | 9 | 2018 |
| Cameo: a Python library for computer aided metabolic engineering and optimization of cell factories. ACS Synth Biol 7: 1163–1166 JGR Cardoso, K Jensen, C Lieven, AS Lærke Hansen, S Galkina, ... | 8 | 2018 |
| FurIOS: a web-based tool for identification of Vibrionaceae species using the fur gene H Machado, J Cardoso, S Giubergia, K Rapacki, L Gram Frontiers in Microbiology 8, 239273, 2017 | 5 | 2017 |
| An algorithm to assemble gene-protein-reaction associations for genome-scale metabolic model reconstruction J Cardoso, P Vilaça, S Soares, M Rocha Pattern Recognition in Bioinformatics: 7th IAPR International Conference …, 2012 | 5 | 2012 |
| Development and application of computer-aided design methods for cell factory optimization J Cardoso Technical University of Denmark, 2017 | | 2017 |
| Analysis of gene essentiality in Escherichia coli across strains and growth conditions I Bonde, R Lennen, J Cardoso, A Koza, M Herrgard First Annual Danish Bioinformatics Conference, 2015 | | 2015 |
| A compendium of genetic variant data J Cardoso, LY Schöning, M Herrgard, N Sonnenschein DTU Sustain Conference 2014, 2014 | | 2014 |
Markus HerrgardCTO, BioInnovation InstituteVerified email at bii.dk
