Alessandro M. Varani
Alessandro M. Varani
UNESP - Sao Paulo State University
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Zitiert von
Zitiert von
ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes
AM Varani, P Siguier, E Gourbeyre, V Charneau, M Chandler
Genome biology 12 (3), 1-9, 2011
Insertion Sequence IS26 Reorganizes Plasmids in Clinically Isolated Multidrug-Resistant Bacteria by Replicative Transposition
S He, AB Hickman, AM Varani, P Siguier, M Chandler, JP Dekker, F Dyda
MBio 6 (3), e00762-15, 2015
Everyman's guide to bacterial insertion sequences
P Siguier, E Gourbeyre, A Varani, B Ton-Hoang, M Chandler
Mobile DNA Iii, 555-590, 2015
Building the sugarcane genome for biotechnology and identifying evolutionary trends
N De Setta, CB Monteiro-Vitorello, CJ Metcalfe, GMQ Cruz, LE Del Bem, ...
BMC genomics 15 (1), 1-18, 2014
A Metagenomic Approach to Cyanobacterial Genomics
DO Alvarenga, MF Fiore, AM Varani
Frontiers in Microbiology, 2017
The chloroplast genome of Passiflora edulis (Passifloraceae) assembled from long sequence reads: structural organization and phylogenomic studies in Malpighiales
LA Cauz-Santos, CF Munhoz, N Rodde, S Cauet, AA Santos, HA Penha, ...
Frontiers in Plant Science 8, 334, 2017
Xylella and Xanthomonas mobil'omics
CB Monteiro-Vitorello, MC De Oliveira, MM Zerillo, AM Varani, E Civerolo, ...
Omics: a journal of integrative biology 9 (2), 146-159, 2005
Origins of the Xylella fastidiosa Prophage-Like Regions and Their Impact in Genome Differentiation
A de Mello Varani, RC Souza, HI Nakaya, WC De Lima, ...
PLoS One 3 (12), e4059, 2008
Laterally transferred genomic islands in Xanthomonadales related to pathogenicity and primary metabolism
WC Lima, ACM Paquola, AM Varani, MA Van Sluys, CFM Menck
FEMS microbiology letters 281 (1), 87-97, 2008
The role of prophage in plant-pathogenic bacteria
AM Varani, CB Monteiro-Vitorello, HI Nakaya, MA Van Sluys
Annual review of phytopathology 51, 429-451, 2013
Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments
P Siguier, A Varani, J Perochon, M Chandler
Mobile Genetic Elements, 91-103, 2012
The family bradyrhizobiaceae
JAM de Souza, LMC Alves, A de Mello Varani, EG de Macedo Lemos
The Prokaryotes, 135-154, 2014
NAD biosynthesis evolution in bacteria: lateral gene transfer of kynurenine pathway in Xanthomonadales and Flavobacteriales
WC Lima, AM Varani, CFM Menck
Molecular biology and evolution 26 (2), 399-406, 2009
Mechanisms of evolution in high-consequence drug resistance plasmids
S He, M Chandler, AM Varani, AB Hickman, JP Dekker, F Dyda
MBio 7 (6), e01987-16, 2016
Phylogenetic and antimicrobial resistance gene analysis of Salmonella Typhimurium strains isolated in Brazil by whole genome sequencing
JPF Fernanda Almeida , Amanda Aparecida Seribelli, Marta Inês Cazentini ...
PLoS ONE 13 ((8)e0201882), 16, 2018
A TALE of Transposition: Tn3-Like Transposons Play a Major Role in the Spread of Pathogenicity Determinants of Xanthomonas citri and Other Xanthomonads
RM Ferreira, ACP de Oliveira, LM Moreira, J Belasque Jr, E Gourbeyre, ...
MBio 6 (1), e02505-14, 2015
Strain-specific polyketide synthase genes of Aspergillus niger
LM Ferracin, CB Fier, MLC Vieira, CB Monteiro-Vitorello, ...
International journal of food microbiology 155 (3), 137-145, 2012
Comparative analysis of Mutator-like transposases in sugarcane
M Rossi, PG Araujo, EM De Jesus, AM Varani, MA Van Sluys
Molecular Genetics and Genomics 272 (2), 194-203, 2004
Genomic signatures and co‐occurrence patterns of the ultra‐small Saccharimonadia (phylum CPR/Patescibacteria) suggest a symbiotic lifestyle
LN Lemos, JD Medeiros, F Dini‐Andreote, GR Fernandes, AM Varani, ...
Molecular ecology 28 (18), 4259-4271, 2019
A balanced microbiota efficiently produces methane in a novel high-rate horizontal anaerobic reactor for the treatment of swine wastewater
RAO Rose Maria Dudaa, Juliana da Silva Vantini, Larissa Scattolin Martins ...
Bioresource Technology 197 (10.1016/j.biortech.2015.08.004), 152–160, 2015
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