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Ewan Birney
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Initial sequencing and analysis of the human genome
US DOE Joint Genome Institute: Hawkins Trevor 4 Branscomb Elbert 4 Predki ...
nature 409 (6822), 860-921, 2001
288592001
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
121222012
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
DR Zerbino, E Birney
Genome research 18 (5), 821-829, 2008
105032008
Initial sequencing and comparative analysis of the mouse genome
European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ...
Nature 420 (6915), 520-562, 2002
79732002
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
56672007
A draft sequence of the Neandertal genome
RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ...
science 328 (5979), 710-722, 2010
42432010
Ensembl 2012
P Flicek, MR Amode, D Barrell, K Beal, S Brent, D Carvalho-Silva, ...
Nucleic acids research 40 (D1), D84-D90, 2012
3705*2012
Patterns of somatic mutation in human cancer genomes
C Greenman, P Stephens, R Smith, GL Dalgliesh, C Hunter, G Bignell, ...
Nature 446 (7132), 153-158, 2007
34412007
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
Project management: Fulton Lucinda A. 1 Mardis Elaine R. 1 Wilson Richard K. 1
Nature 432 (7018), 695-716, 2004
27262004
The Pfam protein families database
A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ...
Nucleic acids research 30 (1), 276-280, 2002
26502002
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium Overall coordination (data analysis coordination ...
Nature 489 (7414), 57-74, 2012
26222012
The genome sequence of the malaria mosquito Anopheles gambiae
RA Holt, GM Subramanian, A Halpern, GG Sutton, R Charlab, ...
science 298 (5591), 129-149, 2002
24832002
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
S Durinck, PT Spellman, E Birney, W Huber
Nature protocols 4 (8), 1184-1191, 2009
24242009
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ...
Nature 428 (6982), 493-521, 2004
24052004
Automated generation of heuristics for biological sequence comparison
GSC Slater, E Birney
BMC bioinformatics 6 (1), 1-11, 2005
21662005
GeneWise and genomewise
E Birney, M Clamp, R Durbin
Genome research 14 (5), 988-995, 2004
21082004
Comparative genomics of the eukaryotes
GM Rubin, MD Yandell, JR Wortman, GL Gabor, Miklos, CR Nelson, ...
Science 287 (5461), 2204-2215, 2000
20782000
International network of cancer genome projects
Data coordination centre Kasprzyk (Leader) Arek 1 Stein (Leader) Lincoln D ...
Nature 464 (7291), 993-998, 2010
20572010
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
RIKEN Genome Exploration Research Group Phase I Team: Carninci P. 2 Hayatsu ...
Nature 420 (6915), 563-573, 2002
19672002
The Bioperl toolkit: Perl modules for the life sciences
JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ...
Genome research 12 (10), 1611-1618, 2002
19092002
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