| Catalytic cycle of human glutathione reductase near 1 Å resolution DS Berkholz, HR Faber, SN Savvides, PA Karplus Journal of molecular biology 382 (2), 371-384, 2008 | 144 | 2008 |
| Conformation dependence of backbone geometry in proteins DS Berkholz, MV Shapovalov, RL Dunbrack, PA Karplus Structure 17 (10), 1316-1325, 2009 | 125 | 2009 |
| Normal and Friedreich ataxia cells express different isoforms of frataxin with complementary roles in iron-sulfur cluster assembly O Gakh, T Bedekovics, SF Duncan, DY Smith, DS Berkholz, G Isaya Journal of Biological Chemistry 285 (49), 38486-38501, 2010 | 91 | 2010 |
| Nonplanar peptide bonds in proteins are common and conserved but not biased toward active sites DS Berkholz, CM Driggers, MV Shapovalov, RL Dunbrack Jr, PA Karplus Proceedings of the National Academy of Sciences 109 (2), 449-453, 2012 | 87 | 2012 |
| In vivo Drosophilia genetic model for calcium oxalate nephrolithiasis T Hirata, P Cabrero, DS Berkholz, DP Bondeson, EL Ritman, ... American Journal of Physiology-Renal Physiology 303 (11), F1555-F1562, 2012 | 61 | 2012 |
| Using a conformation-dependent stereochemical library improves crystallographic refinement of proteins DE Tronrud, DS Berkholz, PA Karplus Acta Crystallographica Section D: Biological Crystallography 66 (7), 834-842, 2010 | 49 | 2010 |
| On the occurrence of linear groups in proteins SA Hollingsworth, DS Berkholz, PA Karplus Protein Science 18 (6), 1321-1325, 2009 | 48 | 2009 |
| Protein Geometry Database: a flexible engine to explore backbone conformations and their relationships to covalent geometry DS Berkholz, PB Krenesky, JR Davidson, PA Karplus Nucleic acids research 38 (suppl_1), D320-D325, 2010 | 42 | 2010 |
| Protein assignments without peak lists using higher-order spectra G Benison, DS Berkholz, E Barbar Journal of Magnetic Resonance 189 (2), 173-181, 2007 | 28 | 2007 |
| (φ, ψ) 2 motifs: a purely conformation-based fine-grained enumeration of protein parts at the two-residue level SA Hollingsworth, MC Lewis, DS Berkholz, WK Wong, PA Karplus Journal of molecular biology 416 (1), 78-93, 2012 | 26 | 2012 |
| A forward-looking suggestion for resolving the stereochemical restraints debate: ideal geometry functions PA Karplus, MV Shapovalov, RL Dunbrack Jr, DS Berkholz Acta Crystallographica Section D: Biological Crystallography 64 (3), 335-336, 2008 | 22 | 2008 |
| J Mol Biol. Author manuscript; available in PMC 2013 February 10. Published in final edited form as: J Mol Biol. 2012 February 10; 416 (1): 78–93. doi: 10.1016/j. jmb. 2011.12 … SA Hollingsworth, MC Lewis, DS Berkholz, WK Wong J Mol Biol 416 (1), 78-93, 2012 | | 2012 |
| Normal and Friedreich ataxia cells express different isoforms of frataxin with complementary roles in iron-sulfur cluster assembly (Journal of Biological Chemistry (2010) 285 … O Gakh, T Bedekovics, SF Duncan, DY Smith IV, DS Berkholz, G Isaya Journal of Biological Chemistry 286 (10), 8708, 2011 | | 2011 |
| Modeling protein structure at atomic resolution DS Berkholz Oregon State University, 2009 | | 2009 |
P. Andrew KarplusBiochemistry & Biophysics, Oregon State UniversityVerified email at science.oregonstate.edu
