| Genome sequence of the Brown Norway rat yields insights into mammalian evolution RA Gibbs, L Pachter Nature 428 (6982), 493-521, 2004 | 2165 | 2004 |
| The RCSB protein data bank: integrative view of protein, gene and 3D structural information PW Rose, A Prlić, A Altunkaya, C Bi, AR Bradley, CH Christie, ... Nucleic acids research, gkw1000, 2016 | 493 | 2016 |
| RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy SK Burley, HM Berman, C Bhikadiya, C Bi, L Chen, L Di Costanzo, ... Nucleic acids research 47 (D1), D464-D474, 2019 | 290 | 2019 |
| NGL viewer: web-based molecular graphics for large complexes AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose Bioinformatics 34 (21), 3755-3758, 2018 | 211 | 2018 |
| Protein Data Bank: the single global archive for 3D macromolecular structure data Nucleic acids research 47 (D1), D520-D528, 2019 | 114 | 2019 |
| Protein interface classification by evolutionary analysis JM Duarte, A Srebniak, MA Schärer, G Capitani BMC bioinformatics 13 (1), 334, 2012 | 114 | 2012 |
| CMView: interactive contact map visualization and analysis C Vehlow, H Stehr, M Winkelmann, JM Duarte, L Petzold, J Dinse, ... Bioinformatics 27 (11), 1573-1574, 2011 | 106 | 2011 |
| RCSB Protein Data Bank: Sustaining a living digital data resource that enables breakthroughs in scientific research and biomedical education SK Burley, HM Berman, C Christie, JM Duarte, Z Feng, J Westbrook, ... Protein Science 27 (1), 316-330, 2018 | 99 | 2018 |
| Web-based molecular graphics for large complexes AS Rose, AR Bradley, Y Valasatava, JM Duarte, A Prlić, PW Rose Proceedings of the 21st international conference on Web3D technology, 185-186, 2016 | 81 | 2016 |
| Optimal contact definition for reconstruction of contact maps JM Duarte, R Sathyapriya, H Stehr, I Filippis, M Lappe BMC bioinformatics 11 (1), 1-10, 2010 | 65 | 2010 |
| The structural impact of cancer-associated missense mutations in oncogenes and tumor suppressors H Stehr, SHJ Jang, JM Duarte, C Wierling, H Lehrach, M Lappe, ... Molecular cancer 10 (1), 54, 2011 | 54 | 2011 |
| Defining an essence of structure determining residue contacts in proteins R Sathyapriya, JM Duarte, H Stehr, I Filippis, M Lappe PLoS Comput Biol 5 (12), e1000584, 2009 | 46 | 2009 |
| A PDB-wide, evolution-based assessment of protein-protein interfaces K Baskaran, JM Duarte, N Biyani, S Bliven, G Capitani BMC Structural Biology 14 (1), 22, 2014 | 38 | 2014 |
| Automated evaluation of quaternary structures from protein crystals S Bliven, A Lafita, A Parker, G Capitani, JM Duarte PLoS computational biology 14 (4), e1006104, 2018 | 32 | 2018 |
| An analysis of oligomerization interfaces in transmembrane proteins JM Duarte, N Biyani, K Baskaran, G Capitani BMC structural biology 13 (1), 21, 2013 | 31 | 2013 |
| MMTF—An efficient file format for the transmission, visualization, and analysis of macromolecular structures AR Bradley, AS Rose, A Pavelka, Y Valasatava, JM Duarte, A Prlić, ... PLoS computational biology 13 (6), e1005575, 2017 | 30 | 2017 |
| RCSB Protein Data Bank: Enabling biomedical research and drug discovery DS Goodsell, C Zardecki, L Di Costanzo, JM Duarte, BP Hudson, ... Protein Science 29 (1), 52-65, 2020 | 29 | 2020 |
| PDBWiki: added value through community annotation of the Protein Data Bank H Stehr, JM Duarte, M Lappe, J Bhak, DM Bolser Database 2010, 2010 | 29 | 2010 |
| Assessment of protein assembly prediction in CASP12 A Lafita, S Bliven, A Kryshtafovych, M Bertoni, B Monastyrskyy, JM Duarte, ... Proteins: Structure, Function, and Bioinformatics 86, 247-256, 2018 | 26 | 2018 |
| Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework G Glusman, PW Rose, A Prlić, J Dougherty, JM Duarte, AS Hoffman, ... Genome medicine 9 (1), 1-10, 2017 | 24 | 2017 |
Andreas PrlicUCSD / SDSCVerified email at sdsc.edu
