| An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge CA Brownstein, AH Beggs, N Homer, B Merriman, TW Yu, KC Flannery, ... Genome biology 15, 1-18, 2014 | 119 | 2014 |
| TDP-43 regulates global translational yield by splicing of exon junction complex component SKAR FC Fiesel, SS Weber, J Supper, A Zell, PJ Kahle Nucleic acids research 40 (6), 2668-2682, 2012 | 114 | 2012 |
| Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ... BMC Systems Biology 3, 1-24, 2009 | 100 | 2009 |
| SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks A Dräger, N Hassis, J Supper, A Schröder, A Zell BMC systems biology 2, 1-7, 2008 | 89 | 2008 |
| EDISA: extracting biclusters from multiple time-series of gene expression profiles J Supper, M Strauch, D Wanke, K Harter, A Zell BMC bioinformatics 8, 1-14, 2007 | 86 | 2007 |
| BowTieBuilder: modeling signal transduction pathways J Supper, L Spangenberg, H Planatscher, A Dräger, A Schröder, A Zell BMC systems biology 3, 1-13, 2009 | 52 | 2009 |
| Feedback memetic algorithms for modeling gene regulatory networks C Spieth, F Streichert, J Supper, N Speer, A Zell 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005 | 24 | 2005 |
| Detecting and visualizing gene fusions J Supper, C Gugenmus, J Wollnik, T Drueke, M Scherf, A Hahn, K Grote, ... Methods 59 (1), S24-S28, 2013 | 22 | 2013 |
| Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry H Planatscher, J Supper, O Poetz, D Stoll, T Joos, MF Templin, A Zell Algorithms for Molecular Biology 5, 1-9, 2010 | 22 | 2010 |
| JCell—a Java-based framework for inferring regulatory networks from time series data C Spieth, J Supper, F Streichert, N Speer, A Zell Bioinformatics 22 (16), 2051-2052, 2006 | 17 | 2006 |
| Predicting DNA-binding specificities of eukaryotic transcription factors A Schröder, J Eichner, J Supper, J Eichner, D Wanke, C Henneges, A Zell PloS one 5 (11), e13876, 2010 | 16 | 2010 |
| A two-step clustering for 3-D gene expression data reveals the main features of the Arabidopsis stress response M Strauch, J Supper, C Spieth, D Wanke, J Kilian, K Harter, A Zell Journal of Integrative Bioinformatics 4 (1), 81-93, 2007 | 14 | 2007 |
| Inferring gene regulatory networks by machine learning methods J Supper, H Fröhlich, C Spieth, A Dräger, A Zell Proceedings of the 5th Asia-Pacific Bioinformatics Conference, 247-256, 2007 | 11 | 2007 |
| Benchmarking evolutionary algorithms on convenience kinetics models of the Valine and Leucine Biosynthesis in C. glutamicum A Drager, M Kronfeld, J Supper, H Planatscher, JB Magnus, M Oldiges, ... 2007 IEEE Congress on Evolutionary Computation, 896-903, 2007 | 9 | 2007 |
| Comparing Various Evolutionary Algorithms on the Parameter Optimization of the Valine and Leucine Biosynthesis in Corynebacterium glutamicum A Drager, J Supper, H Planatscher, JB Magnus, M Oldiges, A Zell 2007 IEEE Congress on Evolutionary Computation, 620-627, 2007 | 9 | 2007 |
| Reconstructing linear gene regulatory networks J Supper, C Spieth, A Zell European Conference on Evolutionary Computation, Machine Learning and Data …, 2007 | 9 | 2007 |
| Integrating biological perspectives: A quantum leap for microarray expression analysis D Wanke, J Kilian, U Bloss, E Mangelsen, J Supper, K Harter, ... Quantum Bio-Informatics II: From Quantum Information to Bio-Informatics, 327-344, 2009 | 4 | 2009 |
| The Analysis of Gene Expression and Cis-Regulatory Elements in Large Microarray Expression Datasets D Wanke, J Kilian, J Supper, KW Berendzen, A Zell, K Harter Quantum Bio-Informatics: From Quantum Information to Bio-Informatics, 294-314, 2008 | 4 | 2008 |
| Reverse Engineering Non-Linear Gene Regulatory Networks Based on the Bacteriophage λ cI Circuit J Supper, C Spieth, A Zell 2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005 | 3 | 2005 |
| SBMLsqueezer: Kinetic Laws A Dräger, N Hassis, J Supper, A Schröder, A Zell Univ Tubingen, 2008 | 2 | 2008 |
Andreas ZellProfessor für Informatik, Universität TübingenVerified email at uni-tuebingen.de
