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Paul Wilmes
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Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
K Atarashi, T Tanoue, K Oshima, W Suda, Y Nagano, H Nishikawa, ...
Nature 500 (7461), 232-236, 2013
24522013
A dietary fiber-deprived gut microbiota degrades the colonic mucus barrier and enhances pathogen susceptibility
MS Desai, AM Seekatz, NM Koropatkin, N Kamada, CA Hickey, M Wolter, ...
Cell 167 (5), 1339-1353. e21, 2016
15732016
Challenges in microbial ecology: building predictive understanding of community function and dynamics
S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ...
The ISME journal 10 (11), 2557-2568, 2016
5292016
Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
S Magnúsdóttir, A Heinken, L Kutt, DA Ravcheev, E Bauer, A Noronha, ...
Nature biotechnology 35 (1), 81-89, 2017
5002017
A microfluidics-based in vitro model of the gastrointestinal human–microbe interface
P Shah, JV Fritz, E Glaab, MS Desai, K Greenhalgh, A Frachet, ...
Nature communications 7 (1), 1-15, 2016
4092016
Metaproteomics: studying functional gene expression in microbial ecosystems
P Wilmes, PL Bond
Trends in microbiology 14 (2), 92-97, 2006
4002006
The application of two‐dimensional polyacrylamide gel electrophoresis and downstream analyses to a mixed community of prokaryotic microorganisms
P Wilmes, PL Bond
Environmental Microbiology 6 (9), 911-920, 2004
3912004
Human gut microbiome: function matters
A Heintz-Buschart, P Wilmes
Trends in microbiology 26 (7), 563-574, 2018
3432018
The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder
A Heintz‐Buschart, U Pandey, T Wicke, F Sixel‐Döring, A Janzen, ...
Movement disorders 33 (1), 88-98, 2018
3322018
Global diversity and biogeography of bacterial communities in wastewater treatment plants
L Wu, D Ning, B Zhang, Y Li, P Zhang, X Shan, Q Zhang, MR Brown, Z Li, ...
Nature microbiology 4 (7), 1183-1195, 2019
3022019
Characterization of extracellular polymeric substances from acidophilic microbial biofilms
Y Jiao, GD Cody, AK Harding, P Wilmes, M Schrenk, KE Wheeler, ...
Applied and environmental microbiology 76 (9), 2916-2922, 2010
2572010
Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes
A Heintz-Buschart, P May, CC Laczny, LA Lebrun, C Bellora, A Krishna, ...
Nature microbiology 2 (1), 1-13, 2016
2162016
The complex exogenous RNA spectra in human plasma: an interface with human gut biota?
K Wang, H Li, Y Yuan, A Etheridge, Y Zhou, D Huang, P Wilmes, D Galas
PloS one 7 (12), e51009, 2012
2002012
Extensive transmission of microbes along the gastrointestinal tract
TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ...
Elife 8, e42693, 2019
1972019
Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
P Wilmes, AF Andersson, MG Lefsrud, M Wexler, M Shah, B Zhang, ...
The ISME journal 2 (8), 853-864, 2008
1972008
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
1872017
VizBin-an application for reference-independent visualization and human-augmented binning of metagenomic data
CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ...
Microbiome 3 (1), 1-7, 2015
1872015
Metaproteomics provides functional insight into activated sludge wastewater treatment
P Wilmes, M Wexler, PL Bond
PLoS One 3 (3), e1778, 2008
1842008
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ...
PloS one 9 (4), e95567, 2014
1832014
The human gut microbiome in health: establishment and resilience of microbiota over a lifetime
K Greenhalgh, KM Meyer, KM Aagaard, P Wilmes
Environmental microbiology 18 (7), 2103-2116, 2016
1812016
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