| Epigenomic diversity in a global collection of Arabidopsis thaliana accessions T Kawakatsu, SSC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ... Cell 166 (2), 492-505, 2016 | 622 | 2016 |
| Resistance gene enrichment sequencing (R en S eq) enables reannotation of the NB‐LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in … F Jupe, K Witek, W Verweij, J Śliwka, L Pritchard, GJ Etherington, ... The Plant Journal 76 (3), 530-544, 2013 | 406 | 2013 |
| Identification and localisation of the NB-LRR gene family within the potato genome F Jupe, L Pritchard, GJ Etherington, K MacKenzie, PJA Cock, F Wright, ... BMC genomics 13, 1-14, 2012 | 344 | 2012 |
| High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell TP Michael, F Jupe, F Bemm, ST Motley, JP Sandoval, C Lanz, O Loudet, ... Nature communications 9 (1), 541, 2018 | 274 | 2018 |
| Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing K Witek, F Jupe, A Witek, D Baker, MD Clark, JDG Jones Nature biotechnology 34 (6), 656-660, 2016 | 266 | 2016 |
| Defining the full tomato NB-LRR resistance gene repertoire using genomic and cDNA RenSeq G Andolfo, F Jupe, K Witek, GJ Etherington, MR Ercolano, JDG Jones BMC plant biology 14, 1-12, 2014 | 179 | 2014 |
| Elevating crop disease resistance with cloned genes JDG Jones, K Witek, W Verweij, F Jupe, D Cooke, S Dorling, L Tomlinson, ... Philosophical Transactions of the Royal Society B: Biological Sciences 369 …, 2014 | 161 | 2014 |
| The complex architecture and epigenomic impact of plant T-DNA insertions F Jupe, AC Rivkin, TP Michael, M Zander, ST Motley, JP Sandoval, ... PLoS genetics 15 (1), e1007819, 2019 | 132 | 2019 |
| NLR-parser: rapid annotation of plant NLR complements B Steuernagel, F Jupe, K Witek, JDG Jones, BBH Wulff Bioinformatics 31 (10), 1665-1667, 2015 | 105 | 2015 |
| A complex resistance locus in Solanum americanum recognizes a conserved Phytophthora effector K Witek, X Lin, HS Karki, F Jupe, AI Witek, B Steuernagel, R Stam, ... Nature Plants 7 (2), 198-208, 2021 | 74 | 2021 |
| Identification and rapid mapping of a gene conferring broad-spectrum late blight resistance in the diploid potato species Solanum verrucosum through DNA capture … X Chen, D Lewandowska, MR Armstrong, K Baker, TY Lim, M Bayer, ... Theoretical and Applied Genetics 131, 1287-1297, 2018 | 67 | 2018 |
| Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control TP Michael, E Ernst, N Hartwick, P Chu, D Bryant, S Gilbert, S Ortleb, ... Genome Research 31 (2), 225-238, 2021 | 57 | 2021 |
| Albugo candida race diversity, ploidy and host‐associated microbes revealed using DNA sequence capture on diseased plants in the field A Jouet, DGO Saunders, M McMullan, B Ward, O Furzer, F Jupe, V Cevik, ... New Phytologist 221 (3), 1529-1543, 2019 | 45 | 2019 |
| Hypersensitive response to Potato virus Y in potato cultivar Sárpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX I Tomczyńska, F Jupe, I Hein, W Marczewski, J Śliwka Molecular Breeding 34, 471-480, 2014 | 43 | 2014 |
| Targeted capture and sequencing of gene-sized DNA molecules. M Giolai, P Paajanen, W Verweij, L Percival-Alwyn, D Baker, K Witek, ... BioTechniques 61 (6), 315, 2016 | 40 | 2016 |
| Epigenetic silencing of a multifunctional plant stress regulator M Zander, BC Willige, Y He, TA Nguyen, AE Langford, R Nehring, ... Elife 8, e47835, 2019 | 38 | 2019 |
| Genomic DNA library preparation for resistance gene enrichment and sequencing (RenSeq) in plants F Jupe, X Chen, W Verweij, K Witek, JDG Jones, I Hein Plant-Pathogen Interactions: Methods and Protocols, 291-303, 2014 | 29 | 2014 |
| Identification of Avramr1 from Phytophthora infestans using long read and cDNA pathogen‐enrichment sequencing (PenSeq) X Lin, T Song, S Fairhead, K Witek, A Jouet, F Jupe, AI Witek, HS Karki, ... Molecular Plant Pathology 21 (11), 1502-1512, 2020 | 28 | 2020 |
| The complex architecture of plant transgene insertions F Jupe, AC Rivkin, TP Michael, M Zander, TS Motley bioRxiv, 282772, 2018 | 5 | 2018 |
| SMRT RenSeq protocol K Witek, F Jupe, AI Witek, D Baker, MD Clark, JDG Jones | 3 | 2016 |
Jonathan D JonesSainsbury LabVerified email at tsl.ac.uk
Jonathan D JonesSainsbury LabVerified email at tsl.ac.uk