Jan Schellenberger
Jan Schellenberger
Grail Bio, LinkedIn, UC San Diego
Verified email at grailbio.com - Homepage
Title
Cited by
Cited by
Year
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2. 0
J Schellenberger, R Que, RMT Fleming, I Thiele, JD Orth, AM Feist, ...
Nature protocols 6 (9), 1290, 2011
13362011
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
J Schellenberger, JO Park, TM Conrad, B Palsson
BMC bioinformatics 11 (1), 213, 2010
5612010
Large-scale in silico modeling of metabolic interactions between cell types in the human brain
NE Lewis, G Schramm, A Bordbar, J Schellenberger, MP Andersen, ...
Nature biotechnology 28 (12), 1279-1285, 2010
2372010
Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
A Bordbar, NE Lewis, J Schellenberger, B Palsson, N Jamshidi
Molecular systems biology 6 (1), 422, 2010
2312010
Use of randomized sampling for analysis of metabolic networks
J Schellenberger, B Palsson
Journal of biological chemistry 284 (9), 5457-5461, 2009
2302009
Model-driven evaluation of the production potential for growth-coupled products of Escherichia coli
AM Feist, DC Zielinski, JD Orth, J Schellenberger, MJ Herrgard, ...
Metabolic engineering 12 (3), 173-186, 2010
2222010
Elimination of thermodynamically infeasible loops in steady-state metabolic models
J Schellenberger, NE Lewis, B Palsson
Biophysical Journal 100 (3), 544-553, 2011
1742011
Uniform sampling of steady-state flux spaces: means to design experiments and to interpret enzymopathies
ND Price, J Schellenberger, BO Palsson
Biophysical journal 87 (4), 2172-2186, 2004
1582004
Functional characterization of alternate optimal solutions of Escherichia coli's transcriptional and translational machinery
I Thiele, RMT Fleming, A Bordbar, J Schellenberger, B Palsson
Biophysical journal 98 (10), 2072-2081, 2010
672010
Minimal metabolic pathway structure is consistent with associated biomolecular interactions
A Bordbar, H Nagarajan, NE Lewis, H Latif, A Ebrahim, S Federowicz, ...
Molecular systems biology 10 (7), 737, 2014
432014
Predicting outcomes of steady-state 13 C isotope tracing experiments using Monte Carlo sampling
J Schellenberger, DC Zielinski, W Choi, S Madireddi, V Portnoy, DA Scott, ...
BMC systems biology 6 (1), 1-14, 2012
352012
Sensitive and specific multi-cancer detection and localization using methylation signatures in cell-free DNA
Annals of Oncology, 2020
182020
Genome-wide cell-free DNA (cfDNA) methylation signatures and effect on tissue of origin (TOO) performance.
MC Liu, A Jamshidi, O Venn, AP Fields, MC Maher, G Cann, H Amini, ...
Journal of Clinical Oncology 37 (15_suppl), 3049-3049, 2019
102019
Monte Carlo simulation in systems biology
J Schellenberger
UC San Diego, 2010
52010
Expanding an audience for an advertising campaign
J Schellenberger, S Kshetramade, K Cao, A Kannan, K Liu, H Liu, C Li, ...
US Patent App. 14/643,431, 2016
42016
Online advertisement forecasting using targeted messages
J Chen, T Cui, Z Deng, S You, D Kumar, D Guangyu, S Kshetramade, ...
US Patent App. 14/642,586, 2016
12016
Jan Schellenberger, Nathan E. Lewis, and Bernhard . Palsson
S Lecuyer, R Rusconi, Y Shen, A Forsyth, H Vlamakis, R Kolter, HA Stone
Biophysical Journal 100, 1381, 2011
12011
Matching entities during data migration
K Cao, D Wang, BBL Kuang, G Seetharama, MR Thakur, ...
US Patent 10,445,061, 2019
2019
Identifying actions to address performance issues in a content item delivery system
Y Gao, LP Wu, J Schellenberger, H Gao
US Patent App. 15/800,007, 2019
2019
Identifying potential computer system problems using machine learning techniques
J Schellenberger, H Gao
US Patent 10,152,363, 2018
2018
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Articles 1–20