Emilie Muller
Emilie Muller
UMR7156 CNRS-Université de Strasbourg/Luxembourg Center for Systems Biomedicine, University of
Verified email at
Cited by
Cited by
Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources
S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ...
PloS one 4 (5), e5584, 2009
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ...
PloS one 9 (4), e95567, 2014
A hundred years of activated sludge: time for a rethink
AR Sheik, EEL Muller, P Wilmes
Frontiers in microbiology 5, 47, 2014
A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems
M Calusinska, X Goux, M Fossépré, EEL Muller, P Wilmes, P Delfosse
Biotechnology for biofuels 11, 1-19, 2018
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation
O Svartström, J Alneberg, N Terrapon, V Lombard, I de Bruijn, J Malmsten, ...
The ISME journal 11 (11), 2538-2551, 2017
IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses
S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ...
Genome biology 17, 1-21, 2016
A biomolecular isolation framework for eco-systems biology
H Roume, E El Muller, T Cordes, J Renaut, K Hiller, P Wilmes
The ISME journal 7 (1), 110-121, 2013
Complete genome sequences of six strains of the genus Methylobacterium
CJ Marx, F Bringel, L Chistoserdova, L Moulin, M Farhan Ul Haque, ...
Journal of Bacteriology 194 (17), 4746-4748, 2012
Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ...
npj Biofilms and Microbiomes 1 (1), 1-11, 2015
Lipid-based biofuel production from wastewater
EEL Muller, AR Sheik, P Wilmes
Current Opinion in Biotechnology 30, 9-16, 2014
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ...
Nature communications 5 (1), 5603, 2014
Condensing the omics fog of microbial communities
EEL Muller, E Glaab, P May, N Vlassis, P Wilmes
Trends in microbiology 21 (7), 325-333, 2013
Using metabolic networks to resolve ecological properties of microbiomes
EEL Muller, K Faust, S Widder, M Herold, SM Arbas, P Wilmes
Current Opinion in Systems Biology 8, 73-80, 2018
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
M Herold, S Martínez Arbas, S Narayanasamy, AR Sheik, ...
Nature communications 11 (1), 5281, 2020
Dichloromethane-degrading bacteria in the genomic age
EEL Muller, F Bringel, S Vuilleumier
Research in Microbiology 162 (9), 869-876, 2011
Sequential isolation of metabolites, RNA, DNA, and proteins from the same unique sample
H Roume, A Heintz-Buschart, EEL Muller, P Wilmes
Methods in enzymology 531, 219-236, 2013
Functional genomics of dichloromethane utilization in Methylobacterium extorquens DM4
EEL Muller, E Hourcade, Y Louhichi‐Jelail, P Hammann, S Vuilleumier, ...
Environmental Microbiology 13 (9), 2518-2535, 2011
Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities
S Narayanasamy, ME E.L., S Abdul R., W Paul
microbial biotechnology, 2015
Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
S Martínez Arbas, S Narayanasamy, M Herold, LA Lebrun, ...
Nature microbiology 6 (1), 123-135, 2021
The system can't perform the operation now. Try again later.
Articles 1–20