Weizhong Li
Weizhong Li
J Craig Venter Institute
Verified email at sdsc.edu - Homepage
Title
Cited by
Cited by
Year
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
W Li, A Godzik
Bioinformatics 22 (13), 1658-1659, 2006
55552006
CD-HIT: accelerated for clustering the next-generation sequencing data
L Fu, B Niu, Z Zhu, S Wu, W Li
Bioinformatics 28 (23), 3150-3152, 2012
26732012
CD-HIT Suite: a web server for clustering and comparing biological sequences
Y Huang, B Niu, Y Gao, L Fu, W Li
Bioinformatics 26 (5), 680-682, 2010
13442010
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families
S Yooseph, G Sutton, DB Rusch, AL Halpern, SJ Williamson, ...
PLoS biology 5 (3), e16, 2007
8922007
Clustering of highly homologous sequences to reduce the size of large protein databases
W Li, L Jaroszewski, A Godzik
Bioinformatics 17 (3), 282-283, 2001
8082001
Comparison of sequence profiles. Strategies for structural predictions using sequence information
L Rychlewski, L Jaroszewski, W Li, A Godzik
Protein Science 9 (2), 232-241, 2000
5922000
FFAS03: a server for profile–profile sequence alignments
L Jaroszewski, L Rychlewski, Z Li, W Li, A Godzik
Nucleic acids research 33 (suppl_2), W284-W288, 2005
5112005
WebMGA: a customizable web server for fast metagenomic sequence analysis
S Wu, Z Zhu, L Fu, B Niu, W Li
BMC genomics 12 (1), 444, 2011
4152011
Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities
JA Gilbert, D Field, Y Huang, R Edwards, W Li, P Gilna, I Joint
PLoS One 3 (8), e3042, 2008
3942008
Community cyberinfrastructure for advanced microbial ecology research and analysis: the CAMERA resource
S Sun, J Chen, W Li, I Altintas, A Lin, S Peltier, K Stocks, EE Allen, ...
Nucleic acids research 39 (suppl 1), D546, 2011
3532011
Cysteine regulation of protein function-as exemplified by NMDA-receptor modulation
SA Lipton, YB Choi, H Takahashi, D Zhang, W Li, A Godzik, LA Bankston
Trends in neurosciences 25 (9), 474-480, 2002
3332002
Tolerating some redundancy significantly speeds up clustering of large protein databases
W Li, L Jaroszewski, A Godzik
Bioinformatics 18 (1), 77-82, 2002
3252002
Artificial and natural duplicates in pyrosequencing reads of metagenomic data
B Niu, L Fu, S Sun, W Li
BMC bioinformatics 11 (1), 187, 2010
2822010
Ultrafast clustering algorithms for metagenomic sequence analysis
W Li, L Fu, B Niu, S Wu, J Wooley
Briefings in bioinformatics 13 (6), 656-668, 2012
2522012
Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
R Loomba, V Seguritan, W Li, T Long, N Klitgord, A Bhatt, PS Dulai, ...
Cell Metabolism 25 (5), 1054-1062. e5, 2017
2482017
Identification of ribosomal RNA genes in metagenomic fragments
Y Huang, P Gilna, W Li
Bioinformatics 25 (10), 1338-1340, 2009
1812009
Alterations in the porcine colon microbiota induced by the gastrointestinal nematode Trichuris suis
RW Li, S Wu, W Li, K Navarro, RD Couch, D Hill, JF Urban
Infection and immunity, IAI. 00141-12, 2012
1442012
A unique substrate recognition profile for matrix metalloproteinase-2
EI Chen, SJ Kridel, EW Howard, W Li, A Godzik, JW Smith
Journal of Biological Chemistry 277 (6), 4485-4491, 2002
1382002
Occurrence of phosphate acquisition genes in Prochlorococcus cells from different ocean regions
AC Martiny, Y Huang, W Li
Environmental microbiology 11 (6), 1340-1347, 2009
1262009
Analysis and comparison of very large metagenomes with fast clustering and functional annotation
W Li
BMC bioinformatics 10 (1), 359, 2009
1162009
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