Arpith Jacob
Arpith Jacob
Unknown affiliation
Verified email at cse.wustl.edu
Title
Cited by
Cited by
Year
Method and apparatus for performing similarity searching on a data stream with respect to a query string
JD Buhler, RD Chamberlain, MA Franklin, K Gyang, AC Jacob, ...
US Patent 7,917,299, 2011
2132011
Active memory cube: A processing-in-memory architecture for exascale systems
R Nair, SF Antao, C Bertolli, P Bose, JR Brunheroto, T Chen, CY Cher, ...
IBM Journal of Research and Development 59 (2/3), 17: 1-17: 14, 2015
1642015
Method and Apparatus for Protein Sequence Alignment Using FPGA Devices
R Chamberlain, J Buhler, A Jacob, J Lancaster, B Harris
US Patent App. 11/836,947, 2008
1192008
Biosequence similarity search on the Mercury system
P Krishnamurthy, J Buhler, R Chamberlain, M Franklin, K Gyang, A Jacob, ...
The Journal of VLSI Signal Processing Systems for Signal, Image, and Video …, 2007
1142007
Mercury BLASTP: Accelerating protein sequence alignment
A Jacob, J Lancaster, J Buhler, B Harris, RD Chamberlain
ACM Transactions on Reconfigurable Technology and Systems (TRETS) 1 (2), 1-44, 2008
812008
FPGA-accelerated seed generation in Mercury BLASTP
A Jacob, J Lancaster, J Buhler, RD Chamberlain
15th Annual IEEE Symposium on Field-Programmable Custom Computing Machines …, 2007
742007
Method and apparatus for performing similarity searching
JD Buhler, RD Chamberlain, MA Franklin, K Gyang, AC Jacob, ...
US Patent 8,515,682, 2013
722013
Hardware technologies for high-performance data-intensive computing
M Gokhale, J Cohen, A Yoo, WM Miller, A Jacob, C Ulmer, R Pearce
Computer 41 (4), 60-68, 2008
682008
Mercury BLASTN: Faster DNA sequence comparison using a streaming hardware architecture
JD Buhler, JM Lancaster, AC Jacob, RD Chamberlain
Proc. of Reconfigurable Systems Summer Institute, 2007
662007
Coordinating GPU threads for OpenMP 4.0 in LLVM
C Bertolli, SF Antao, AE Eichenberger, KOBZ Sura, AC Jacob, T Chen, ...
2014 LLVM Compiler Infrastructure in HPC, 12-21, 2014
652014
Data access optimization in a processing-in-memory system
Z Sura, A Jacob, T Chen, B Rosenburg, O Sallenave, C Bertolli, S Antao, ...
Proceedings of the 12th ACM International Conference on Computing Frontiers, 1-8, 2015
602015
A banded Smith-Waterman FPGA accelerator for Mercury BLASTP
B Harris, AC Jacob, JM Lancaster, J Buhler, RD Chamberlain
2007 International Conference on Field Programmable Logic and Applications …, 2007
552007
Offloading support for OpenMP in Clang and LLVM
SF Antao, A Bataev, AC Jacob, GT Bercea, AE Eichenberger, G Rokos, ...
2016 Third Workshop on the LLVM Compiler Infrastructure in HPC (LLVM-HPC), 1-11, 2016
462016
Preliminary results in accelerating profile HMM search on FPGAs
AC Jacob, JM Lancaster, JD Buhler, RD Chamberlain
2007 IEEE International Parallel and Distributed Processing Symposium, 1-8, 2007
442007
Accelerating Nussinov RNA secondary structure prediction with systolic arrays on FPGAs
A Jacob, J Buhler, RD Chamberlain
2008 International Conference on Application-Specific Systems, Architectures …, 2008
422008
Integrating GPU support for OpenMP offloading directives into Clang
C Bertolli, SF Antao, GT Bercea, AC Jacob, AE Eichenberger, T Chen, ...
Proceedings of the Second Workshop on the LLVM Compiler Infrastructure in …, 2015
382015
Method and apparatus for performing similarity searching
JD Buhler, RD Chamberlain, MA Franklin, K Gyang, AC Jacob, ...
US Patent 9,547,680, 2017
352017
Performance analysis of OpenMP on a GPU using a CORAL proxy application
GT Bercea, C Bertolli, SF Antao, AC Jacob, AE Eichenberger, T Chen, ...
Proceedings of the 6th International Workshop on Performance Modeling …, 2015
322015
Performance analysis and optimization of Clang's OpenMP 4.5 GPU support
M Martineau, S McIntosh-Smith, C Bertolli, AC Jacob, SF Antao, ...
2016 7th International Workshop on Performance Modeling, Benchmarking and …, 2016
242016
Rapid RNA folding: analysis and acceleration of the Zuker recurrence
AC Jacob, JD Buhler, RD Chamberlain
2010 18th IEEE Annual International Symposium on Field-Programmable Custom …, 2010
222010
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Articles 1–20