Rosalba Lepore
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SWISS-MODEL: homology modelling of protein structures and complexes
A Waterhouse, M Bertoni, S Bienert, G Studer, G Tauriello, R Gumienny, ...
Nucleic acids research 46 (W1), W296-W303, 2018
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 1-19, 2016
Artemether resistance in vitro is linked to mutations in PfATP6 that also interact with mutations in PfMDR1 in travellers returning with Plasmodium falciparum infections
DR Pillai, R Lau, K Khairnar, R Lepore, A Via, HM Staines, S Krishna
Malaria journal 11 (1), 1-9, 2012
PIGSPro: prediction of immunoGlobulin structures v2
R Lepore, PP Olimpieri, MA Messih, A Tramontano
Nucleic Acids Research 45 (W1), W17-W23, 2017
Multistep current signal in protein translocation through graphene nanopores
EL Bonome, R Lepore, D Raimondo, F Cecconi, A Tramontano, ...
The Journal of Physical Chemistry B 119 (18), 5815-5823, 2015
Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies
MA Messih, R Lepore, P Marcatili, A Tramontano
Bioinformatics 30 (19), 2733-2740, 2014
LoopIng: a template-based tool for predicting the structure of protein loops
MA Messih, R Lepore, A Tramontano
Bioinformatics 31 (23), 3767-3772, 2015
PepComposer: computational design of peptides binding to a given protein surface
A Obarska-Kosinska, A Iacoangeli, R Lepore, A Tramontano
Nucleic acids research 44 (W1), W522-W528, 2016
Insights on protein thermal stability: a graph representation of molecular interactions
M Miotto, PP Olimpieri, L Di Rienzo, F Ambrosetti, P Corsi, R Lepore, ...
Bioinformatics 35 (15), 2569-2577, 2019
Investigation of a potential mechanism for the inhibition of SmTGR by Auranofin and its implications for Plasmodium falciparum inhibition
A Caroli, S Simeoni, R Lepore, A Tramontano, A Via
Biochemical and biophysical research communications 417 (1), 576-581, 2012
Neoantigen prediction and computational perspectives towards clinical benefit: recommendations from the ESMO Precision Medicine Working Group
L De Mattos-Arruda, M Vazquez, F Finotello, R Lepore, E Porta, J Hundal, ...
Annals of oncology, 2020
Superposition-free comparison and clustering of antibody binding sites: implications for the prediction of the nature of their antigen
L Di Rienzo, E Milanetti, R Lepore, PP Olimpieri, A Tramontano
Scientific reports 7 (1), 1-10, 2017
Identification of the Schistosoma mansoni molecular target for the antimalarial drug artemether
R Lepore, S Simeoni, D Raimondo, A Caroli, A Tramontano, A Via
Journal of chemical information and modeling 51 (11), 3005-3016, 2011
Previous SARS-CoV-2 infection increases B. 1.1. 7 cross-neutralization by vaccinated individuals
B Trinité, E Pradenas, S Marfil, C Rovirosa, V Urrea, F Tarrés-Freixas, ...
Viruses 13 (6), 1135, 2021
Genome-wide RNA-seq analysis indicates that the DAG1 transcription factor promotes hypocotyl elongation acting on ABA, ethylene and auxin signaling
R Lorrai, F Gandolfi, A Boccaccini, V Ruta, M Possenti, A Tramontano, ...
Scientific reports 8 (1), 1-13, 2018
Target highlights in CASP13: Experimental target structures through the eyes of their authors
R Lepore, A Kryshtafovych, M Alahuhta, HA Veraszto, YJ Bomble, ...
Proteins: structure, function, and bioinformatics 87 (12), 1037-1057, 2019
Modeling of protein tertiary and quaternary structures based on evolutionary information
G Studer, G Tauriello, S Bienert, AM Waterhouse, M Bertoni, L Bordoli, ...
Computational Methods in Protein Evolution, 301-316, 2019
About the need to make computational models of biological macromolecules available and discoverable
LA Abriata, R Lepore, M Dal Peraro
Bioinformatics 36 (9), 2952-2954, 2020
TiPs: a database of therapeutic targets in pathogens and associated tools
R Lepore, A Tramontano, A Via
Bioinformatics 29 (14), 1821-1822, 2013
DGLinker: flexible knowledge-graph prediction of disease–gene associations
J Hu, R Lepore, RJB Dobson, A Al-Chalabi, D M Bean, A Iacoangeli
Nucleic Acids Research, 2021
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