Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data M Masseroli, A Canakoglu, P Pinoli, A Kaitoua, A Gulino, O Horlova, ... Bioinformatics 35 (5), 729-736, 2019 | 28 | 2019 |
Integration of Biomolecular Interaction Data in a Genomic and Proteomic Data Warehouse to Support Biomedical Knowledge Discovery A Canakoglu, G Ghisalberti, M Masseroli Springer, 2012 | 19 | 2012 |
Integration and querying of genomic and proteomic semantic annotations for biomedical knowledge extraction M Masseroli, A Canakoglu, S Ceri IEEE/ACM transactions on computational biology and bioinformatics 13 (2 …, 2015 | 13 | 2015 |
Integrative warehousing of biomolecular information to support complex multi-topic queries for biomedical knowledge discovery A Canakoglu, M Masseroli, S Ceri, L Tettamanti, G Ghisalberti, A Campi 13th IEEE International Conference on BioInformatics and BioEngineering, 1-4, 2013 | 13 | 2013 |
Visual composition of complex queries on an integrative Genomic and Proteomic Data Warehouse F Pessina, M Masseroli, A Canakoglu Engineering 5 (10B), 94-98, 2013 | 12 | 2013 |
GenoSurf: metadata driven semantic search system for integrated genomic datasets A Canakoglu, A Bernasconi, A Colombo, M Masseroli, S Ceri Database 2019, 2019 | 10 | 2019 |
ViruSurf: an integrated database to investigate viral sequences A Canakoglu, P Pinoli, A Bernasconi, T Alfonsi, DP Melidis, S Ceri Nucleic acids research 49 (D1), D817-D824, 2021 | 8 | 2021 |
Empowering Virus Sequence Research Through Conceptual Modeling A Bernasconi, A Canakoglu, P Pinoli, S Ceri International Conference on Conceptual Modeling, 388-402, 2020 | 8 | 2020 |
Ontology-driven metadata enrichment for genomic datasets A Bernasconi, A Canakoglu, S Ceri Semantic Web Applications and Tools for Healthcare and Life Sciences, 2018 | 7 | 2018 |
Exploiting ladder networks for gene expression classification G Golcuk, MA Tuncel, A Canakoglu International Conference on Bioinformatics and Biomedical Engineering, 270-278, 2018 | 7 | 2018 |
Detection of gene annotations and protein-protein interaction associated disorders through transitive relationships between integrated annotations M Masseroli, A Canakoglu, M Quigliatti BMC genomics 16 (6), 1-16, 2015 | 7 | 2015 |
PyGMQL: scalable data extraction and analysis for heterogeneous genomic datasets L Nanni, P Pinoli, A Canakoglu, S Ceri BMC bioinformatics 20 (1), 1-11, 2019 | 6 | 2019 |
Overview of GeCo: a project for exploring and integrating signals from the genome S Ceri, A Bernasconi, A Canakoglu, A Gulino, A Kaitoua, M Masseroli, ... International Conference on Data Analytics and Management in Data Intensive …, 2017 | 6 | 2017 |
The road towards data integration in human genomics: players, steps and interactions A Bernasconi, A Canakoglu, M Masseroli, S Ceri Briefings in Bioinformatics, 2020 | 5 | 2020 |
META-BASE: a novel architecture for large-scale genomic metadata integration A Bernasconi, A Canakoglu, M Masseroli, S Ceri IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2020 | 5 | 2020 |
Exploiting conceptual modeling for searching genomic metadata: A quantitative and qualitative empirical study A Bernasconi, A Canakoglu, S Ceri International Conference on Conceptual Modeling, 83-94, 2019 | 5 | 2019 |
Exploring genomic datasets: from batch to interactive and back L Nanni, P Pinoli, A Canakoglu, S Ceri Proceedings of the 5th International Workshop on Exploratory Search in …, 2018 | 5 | 2018 |
From a conceptual model to a knowledge graph for genomic datasets A Bernasconi, A Canakoglu, S Ceri International Conference on Conceptual Modeling, 352-360, 2019 | 4 | 2019 |
Integration of genomic, proteomic and biomolecular interaction data to support biomedical knowledge discovery A Canakoglu, G Ghisalberti, M Masseroli International Meeting on Computational Intelligence Methods for …, 2011 | 3 | 2011 |
A review on viral data sources and search systems for perspective mitigation of COVID-19 A Bernasconi, A Canakoglu, M Masseroli, P Pinoli, S Ceri Briefings in bioinformatics, 2020 | 2 | 2020 |