Leo Lahti
Leo Lahti
Department of Computing, University of Turku, Finland
Verified email at - Homepage
Cited by
Cited by
Binning metagenomic contigs by coverage and composition
J Alneberg, BS Bjarnason, I De Bruijn, M Schirmer, J Quick, UZ Ijaz, ...
Nature methods 11 (11), 1144-1146, 2014
Fat, fibre and cancer risk in African Americans and rural Africans
SJD O’Keefe, JV Li, L Lahti, J Ou, F Carbonero, K Mohammed, JM Posma, ...
Nature communications 6 (1), 1-14, 2015
Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men
A Salonen, L Lahti, J Salojärvi, G Holtrop, K Korpela, SH Duncan, P Date, ...
The ISME journal 8 (11), 2218-2230, 2014
Metagenomics meets time series analysis: unraveling microbial community dynamics
K Faust, L Lahti, D Gonze, WM De Vos, J Raes
Current opinion in microbiology 25, 56-66, 2015
Intestinal microbiota in healthy adults: temporal analysis reveals individual and common core and relation to intestinal symptoms
J Jalanka-Tuovinen, A Salonen, J Nikkilä, O Immonen, R Kekkonen, ...
PloS one 6 (7), e23035, 2011
CDKN2A, NF2, and JUN are dysregulated among other genes by miRNAs in malignant mesothelioma—A miRNA microarray analysis
M Guled, L Lahti, PM Lindholm, K Salmenkivi, I Bagwan, AG Nicholson, ...
Genes, Chromosomes and Cancer 48 (7), 615-623, 2009
Tools for microbiome analysis in R
L Lahti, S Shetty, T Blake, J Salojarvi
Version 1 (5), 28, 2017
Tipping elements in the human intestinal ecosystem
L Lahti, J Salojärvi, A Salonen, M Scheffer, WM De Vos
Nature communications 5 (1), 1-10, 2014
Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data
L Lahti, A Salonen, RA Kekkonen, J Salojärvi, J Jalanka-Tuovinen, ...
PeerJ 1, e32, 2013
microbiome R package
L Lahti, S Shetty
Integrative analysis of microRNA, mRNA and aCGH data reveals asbestos‐and histology‐related changes in lung cancer
P Nymark, M Guled, I Borze, A Faisal, L Lahti, K Salmenkivi, E Kettunen, ...
Genes, Chromosomes and Cancer 50 (8), 585-597, 2011
Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies
SA Shetty, F Hugenholtz, L Lahti, H Smidt, WM de Vos
FEMS microbiology reviews 41 (2), 182-199, 2017
Improved taxonomic assignment of human intestinal 16S rRNA sequences by a dedicated reference database
J Ritari, J Salojärvi, L Lahti, WM de Vos
BMC genomics 16 (1), 1-10, 2015
The adult intestinal core microbiota is determined by analysis depth and health status
A Salonen, J Salojärvi, L Lahti, WM de Vos
Clinical Microbiology and Infection 18, 16-20, 2012
Microbial communities as dynamical systems
D Gonze, KZ Coyte, L Lahti, K Faust
Current opinion in microbiology 44, 41-49, 2018
Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment
LJ Marcos-Zambrano, K Karaduzovic-Hadziabdic, T Loncar Turukalo, ...
Frontiers in microbiology, 313, 2021
Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects
E Buelow, S Fuentes, WAA de Steenhuijsen Piters, L Lahti, JR Bayjanov, ...
Microbiome 5 (1), 1-10, 2017
MicroRNA profiling predicts survival in anti-EGFR treated chemorefractory metastatic colorectal cancer patients with wild-type KRAS and BRAF
N Mosakhani, L Lahti, I Borze, ML Karjalainen-Lindsberg, J Sundström, ...
Cancer genetics 205 (11), 545-551, 2012
A novel atlas of gene expression in human skeletal muscle reveals molecular changes associated with aging
J Su, C Ekman, N Oskolkov, L Lahti, K Ström, A Brazma, L Groop, J Rung, ...
Skeletal muscle 5 (1), 1-12, 2015
Multi-stability and the origin of microbial community types
D Gonze, L Lahti, J Raes, K Faust
The ISME journal 11 (10), 2159-2166, 2017
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