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Sven Sahle
Sven Sahle
Verified email at bioquant.uni-heidelberg.de
Title
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Cited by
Year
COPASI—a complex pathway simulator
S Hoops, S Sahle, R Gauges, C Lee, J Pahle, N Simus, M Singhal, L Xu, ...
Bioinformatics 22 (24), 3067-3074, 2006
29632006
The systems biology graphical notation
NL Novère, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ...
Nature biotechnology 27 (8), 735-741, 2009
10482009
Reproducible computational biology experiments with SED-ML-the simulation experiment description markup language
D Waltemath, R Adams, FT Bergmann, M Hucka, F Kolpakov, AK Miller, ...
BMC systems biology 5, 1-10, 2011
2902011
Computational modeling of biochemical networks using COPASI
P Mendes, S Hoops, S Sahle, R Gauges, J Dada, U Kummer
Systems Biology, 17-59, 2009
2452009
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
2032020
Minimum information about a simulation experiment (MIASE)
D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ...
PLoS computational biology 7 (4), e1001122, 2011
1632011
The systems biology markup language (SBML): language specification for level 3 version 2 core release 2
M Hucka, FT Bergmann, C Chaouiya, A Dräger, S Hoops, SM Keating, ...
Journal of integrative bioinformatics 16 (2), 20190021, 2019
1092019
Design of hyperchaotic flows
G Baier, S Sahle
Physical Review E 51 (4), R2712, 1995
1031995
COPASI and its applications in biotechnology
FT Bergmann, S Hoops, B Klahn, U Kummer, P Mendes, J Pahle, S Sahle
Journal of biotechnology 261, 215-220, 2017
932017
The Systems Biology Markup Language (SBML): language specification for level 3 version 1 core
M Hucka, FT Bergmann, S Hoops, SM Keating, S Sahle, JC Schaff, ...
Journal of integrative bioinformatics 12 (2), 382-549, 2015
902015
The systems biology markup language (SBML): language specification for level 3 version 2 core
M Hucka, FT Bergmann, A Dräger, S Hoops, SM Keating, N Le Novère, ...
Journal of integrative bioinformatics 15 (1), 20170081, 2018
822018
The systems biology markup language (SBML): Language specification for level 3 version 1 core
L Smith, D Wilkinson, M Hucka, F Bergmann, S Hoops, S Keating, S Sahle, ...
Nature Precedings, 1-1, 2010
782010
Applications and trends in systems biology in biochemistry
K Hübner, S Sahle, U Kummer
The FEBS journal 278 (16), 2767-2857, 2011
722011
Systems biology markup language (SBML) level 2: Structures and facilities for model definitions
M Hucka, S Hoops, S Keating, N Le Novère, S Sahle, D Wilkinson
Nature Precedings, 1-1, 2008
662008
Combining theoretical analysis and experimental data generation reveals IRF9 as a crucial factor for accelerating interferon α‐induced early antiviral signalling
T Maiwald, A Schneider, H Busch, S Sahle, N Gretz, TS Weiss, U Kummer, ...
The FEBS journal 277 (22), 4741-4754, 2010
642010
PEtab—interoperable specification of parameter estimation problems in systems biology
L Schmiester, Y Schälte, FT Bergmann, T Camba, E Dudkin, J Egert, ...
PLoS computational biology 17 (1), e1008646, 2021
632021
A robust, locally interpretable algorithm for Lyapunov exponents
F Grond, HH Diebner, S Sahle, A Mathias, S Fischer, OE Rossler
Chaos, Solitons & Fractals 16 (5), 841-852, 2003
582003
A model diagram layout extension for SBML
R Gauges, U Rost, S Sahle, K Wegner
Bioinformatics 22 (15), 1879-1885, 2006
532006
A new strategy for assessing sensitivities in biochemical models
S Sahle, P Mendes, S Hoops, U Kummer
Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008
522008
Dynamics and feedback loops in the transforming growth factor β signaling pathway
K Wegner, A Bachmann, JU Schad, P Lucarelli, S Sahle, P Nickel, ...
Biophysical chemistry 162, 22-34, 2012
482012
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