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Malcolm E Fisher
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A promoter-level mammalian expression atlas
Nature 507 (7493), 462-470, 2014
18062014
The gene ontology knowledgebase in 2023
SA Aleksander, J Balhoff, S Carbon, JM Cherry, HJ Drabkin, D Ebert, ...
Genetics 224 (1), iyad031, 2023
9002023
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
6372015
Highly conserved non-coding elements on either side of SOX9 associated with Pierre Robin sequence
S Benko, JA Fantes, J Amiel, DJ Kleinjan, S Thomas, J Ramsay, ...
Nature genetics 41 (3), 359-364, 2009
4962009
Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma
R Shukla, KR Upton, M Muņoz-Lopez, DJ Gerhardt, ME Fisher, T Nguyen, ...
Cell 153 (1), 101-111, 2013
4402013
FANTOM5 CAGE profiles of human and mouse samples
S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ...
Scientific data 4 (1), 1-10, 2017
2622017
Xenbase: a genomic, epigenomic and transcriptomic model organism database
K Karimi, JD Fortriede, VS Lotay, KA Burns, DZ Wang, ME Fisher, TJ Pells, ...
Nucleic acids research 46 (D1), D861-D868, 2018
2112018
Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation
H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ...
Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014
1502014
Gain-of-function mutations of ARHGAP31, a Cdc42/Rac1 GTPase regulator, cause syndromic cutis aplasia and limb anomalies
L Southgate, RD Machado, KM Snape, M Primeau, D Dafou, DM Ruddy, ...
The American Journal of Human Genetics 88 (5), 574-585, 2011
1352011
EMAGE mouse embryo spatial gene expression database: 2010 update
L Richardson, S Venkataraman, P Stevenson, Y Yang, N Burton, J Rao, ...
Nucleic acids research 38 (suppl_1), D703-D709, 2010
1082010
Loss of the BMP antagonist, SMOC-1, causes Ophthalmo-acromelic (Waardenburg Anophthalmia) syndrome in humans and mice
J Rainger, E van Beusekom, JK Ramsay, L McKie, L Al-Gazali, R Pallotta, ...
PLoS genetics 7 (7), e1002114, 2011
1022011
Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database
JD Fortriede, TJ Pells, S Chu, P Chaturvedi, DZ Wang, ME Fisher, ...
Nucleic Acids Research 48 (D1), D776-D782, 2020
852020
eFGF is required for activation of XmyoD expression in the myogenic cell lineage of Xenopus laevis
ME Fisher, HV Isaacs, ME Pownall
Oxford University Press for The Company of Biologists Limited 129 (6), 1307-1315, 2002
842002
Xenbase: Facilitating the Use of Xenopus to Model Human Disease
MJ Nenni, ME Fisher, C James-Zorn, TJ Pells, V Ponferrada, S Chu, ...
Frontiers in physiology 10, 154, 2019
832019
Xenbase: key features and resources of the Xenopus model organism knowledgebase
M Fisher, C James-Zorn, V Ponferrada, AJ Bell, N Sundararaj, ...
Genetics 224 (1), iyad018, 2023
602023
Integrating technologies for comparing 3D gene expression domains in the developing chick limb
ME Fisher, AK Clelland, A Bain, RA Baldock, P Murphy, H Downie, ...
Developmental biology 317 (1), 13-23, 2008
572008
Esrrg functions in early branch generation of the ureteric bud and is essential for normal development of the renal papilla
R Berry, L Harewood, L Pei, M Fisher, D Brownstein, A Ross, WA Alaynick, ...
Human Molecular Genetics 20 (5), 917-926, 2011
462011
Identification of genes downstream of the Shh signalling in the developing chick wing and syn-expressed with Hoxd13 using microarray and 3D computational analysis
F Bangs, M Welten, MG Davey, M Fisher, Y Yin, H Downie, B Paton, ...
Mechanisms of development 127 (9-12), 428-441, 2010
292010
Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database
C James-Zorn, V Ponferrada, ME Fisher, K Burns, J Fortriede, E Segerdell, ...
Eukaryotic Genomic Databases: Methods and Protocols, 251-305, 2018
282018
3D expression patterns of cell cycle genes in the developing chick wing and comparison with expression patterns of genes implicated in digit specification
M Welten, G Pavlovska, Y Chen, Y Teruoka, M Fisher, F Bangs, M Towers, ...
Developmental Dynamics 240 (5), 1278-1288, 2011
202011
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