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Margaret Woodhouse
Margaret Woodhouse
Computational Biologist, USDA-ARS
Verified email at margaretwoodhouse.com
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Cited by
Cited by
Year
The pineapple genome and the evolution of CAM photosynthesis
R Ming, R VanBuren, CM Wai, H Tang, MC Schatz, JE Bowers, E Lyons, ...
Nature genetics 47 (12), 1435-1442, 2015
5502015
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
MB Hufford, AS Seetharam, MR Woodhouse, KM Chougule, S Ou, J Liu, ...
bioRxiv, 2021.01. 14.426684, 2013
428*2013
Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homeologs
MR Woodhouse, JC Schnable, BS Pedersen, E Lyons, D Lisch, ...
PLoS Biol 8 (6), e1000409, 2010
3152010
MaizeGDB 2018: the maize multi-genome genetics and genomics database
JL Portwood, MR Woodhouse, EK Cannon, JM Gardiner, LC Harper, ...
Nucleic acids research 47 (D1), D1146-D1154, 2019
2832019
Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules
KA Maher, M Bajic, K Kajala, M Reynoso, G Pauluzzi, DA West, ...
The Plant Cell 30 (1), 15-36, 2018
2492018
Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants
M Freeling, MR Woodhouse, S Subramaniam, G Turco, D Lisch, ...
Current opinion in plant biology 15 (2), 131-139, 2012
2302012
The maize W22 genome provides a foundation for functional genomics and transposon biology
NM Springer, SN Anderson, CM Andorf, KR Ahern, F Bai, O Barad, ...
Nature genetics 50 (9), 1282-1288, 2018
2152018
Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids
MR Woodhouse, F Cheng, JC Pires, D Lisch, M Freeling, X Wang
Proceedings of the National Academy of Sciences 111 (14), 5283-5288, 2014
2022014
Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy
H Tang, MR Woodhouse, F Cheng, JC Schnable, BS Pedersen, G Conant, ...
Genetics 190 (4), 1563-1574, 2012
1882012
Technological advances in maize breeding: past, present and future
C Andorf, WD Beavis, M Hufford, S Smith, WP Suza, K Wang, ...
Theoretical and Applied Genetics 132 (3), 817-849, 2019
1672019
A pan-genomic approach to genome databases using maize as a model system
MR Woodhouse, EK Cannon, JL Portwood, LC Harper, JM Gardiner, ...
BMC Plant Biology 21 (1), 1-10, 2021
1522021
Evolutionary flexibility in flooding response circuitry in angiosperms
MA Reynoso, K Kajala, M Bajic, DA West, G Pauluzzi, AI Yao, K Hatch, ...
Science 365 (6459), 1291-1295, 2019
1292019
Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors
MR Woodhouse, M Freeling, D Lisch
PLoS biology 4 (10), e339, 2006
1242006
Epigenetic regulation of subgenome dominance following whole genome triplication in Brassica rapa
F Cheng, C Sun, J Wu, J Schnable, MR Woodhouse, J Liang, C Cai, ...
New Phytologist 211 (1), 288-299, 2016
1122016
Gapless assembly of maize chromosomes using long-read technologies
J Liu, AS Seetharam, K Chougule, S Ou, KW Swentowsky, JI Gent, ...
Genome biology 21 (1), 1-17, 2020
1072020
The zygotic transition is initiated in unicellular plant zygotes with asymmetric activation of parental genomes
SN Anderson, CS Johnson, J Chesnut, DS Jones, I Khanday, ...
Developmental Cell 43 (3), 349-358. e4, 2017
1012017
GrainGenes: centralized small grain resources and digital platform for geneticists and breeders
VC Blake, MR Woodhouse, GR Lazo, SG Odell, CP Wight, NA Tinker, ...
Database 2019, 2019
922019
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture
L Harper, J Campbell, EKS Cannon, S Jung, M Poelchau, R Walls, ...
Database 2018, 2018
832018
The mop1 (mediator of paramutation1) mutant progressively reactivates one of the two genes encoded by the MuDR transposon in maize
MR Woodhouse, M Freeling, D Lisch
Genetics 172 (1), 579-592, 2006
792006
GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
N Manchanda, JL Portwood, MR Woodhouse, AS Seetharam, ...
BMC genomics 21 (1), 1-9, 2020
762020
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