| Chaste: An Open Source C++ Library for Computational Physiology and Biology GR Mirams, CJ Arthurs, MO Bernabeu, R Bordas, J Cooper, A Corrias, ... PLoS Computational Biology 9 (3), 2013 | 508 | 2013 |
| Simulation of multiple ion channel block provides improved early prediction of compounds’ clinical torsadogenic risk GR Mirams, Y Cui, A Sher, M Fink, J Cooper, BM Heath, NC McMahon, ... Cardiovascular research 91 (1), 53-61, 2011 | 342 | 2011 |
| Chaste: a test-driven approach to software development for biological modelling J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, ... Computer Physics Communications 180 (12), 2452-2471, 2009 | 307 | 2009 |
| An integrative computational model for intestinal tissue renewal IMM Van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, ... Cell proliferation 42 (5), 617-636, 2009 | 186 | 2009 |
| CellML and associated tools and techniques A Garny, DP Nickerson, J Cooper, RW Santos, AK Miller, S McKeever, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008 | 173 | 2008 |
| Minimum Information About a Simulation Experiment (MIASE) D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ... PLoS Computational Biology 7 (4), e1001122, 2011 | 170 | 2011 |
| COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15 (1), 369, 2014 | 162 | 2014 |
| A computational study of discrete mechanical tissue models P Pathmanathan, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, ... Physical biology 6, 036001, 2009 | 148 | 2009 |
| Computational assessment of drug‐induced effects on the electrocardiogram: from ion channel to body surface potentials N Zemzemi, MO Bernabeu, J Saiz, J Cooper, P Pathmanathan, ... British Journal of Pharmacology 168 (3), 718-733, 2013 | 130 | 2013 |
| Chaste: using agile programming techniques to develop computational biology software J Pitt-Francis, MO Bernabeu, J Cooper, A Garny, L Momtahan, J Osborne, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008 | 107 | 2008 |
| A numerical guide to the solution of the bidomain equations of cardiac electrophysiology P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, A Garny, ... Progress in biophysics and molecular biology 102 (2-3), 136-155, 2010 | 100 | 2010 |
| An overview of the CellML API and its implementation A Miller, J Marsh, A Reeve, A Garny, R Britten, M Halstead, J Cooper, ... BMC bioinformatics 11 (1), 178, 2010 | 95 | 2010 |
| Promoting coordinated development of community-based information standards for modeling in biology: the COMBINE initiative M Hucka, DP Nickerson, GD Bader, FT Bergmann, J Cooper, E Demir, ... Frontiers in Bioengineering and Biotechnology 3, 2015 | 92 | 2015 |
| Chaste: Cancer, Heart and Soft Tissue Environment F Cooper, R Baker, M Bernabeu, R Bordas, L Bowler, A Bueno-Orovio, ... Journal of Open Source Software 5 (47), 1848, 2020 | 71 | 2020 |
| Ten simple rules for a successful cross-disciplinary collaboration B Knapp, R Bardenet, MO Bernabeu, R Bordas, M Bruna, B Calderhead, ... PLoS computational biology 11 (4), e1004214, 2015 | 70 | 2015 |
| The Cardiac Electrophysiology Web Lab J Cooper, M Scharm, GR Mirams Biophysical Journal 110 (2), 292-300, 2016 | 69 | 2016 |
| High-throughput functional curation of cellular electrophysiology models J Cooper, GR Mirams, SA Niederer Progress in biophysics and molecular biology 107 (1), 11-20, 2011 | 65 | 2011 |
| A call for virtual experiments: accelerating the scientific process J Cooper, JO Vik, D Waltemath Progress in biophysics and molecular biology 117 (1), 99-106, 2015 | 61 | 2015 |
| Ten simple rules for effective computational research JM Osborne, MO Bernabeu, M Bruna, B Calderhead, J Cooper, ... PLoS Comput Biol 10 (3), e1003506, 2014 | 59 | 2014 |
| Chaste: incorporating a novel multi-scale spatial and temporal algorithm into a large-scale open source library MO Bernabeu, R Bordas, P Pathmanathan, J Pitt-Francis, J Cooper, ... Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2009 | 48 | 2009 |
David GavaghanProfessor of Computational Biology, University of OxfordVerified email at cs.ox.ac.uk
