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Alexander A. Aksenov
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Best practices for analysing microbiomes
R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ...
Nature Reviews Microbiology 16 (7), 410-422, 2018
14562018
SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information
K Dührkop, M Fleischauer, M Ludwig, AA Aksenov, AV Melnik, M Meusel, ...
Nature methods 16 (4), 299-302, 2019
9712019
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature methods 17 (9), 905-908, 2020
7952020
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), 10.1128/msystems. 00031-18, 2018
6522018
Inflammation-induced IgA+ cells dismantle anti-liver cancer immunity
S Shalapour, XJ Lin, IN Bastian, J Brain, AD Burt, AA Aksenov, ...
Nature 551 (7680), 340-345, 2017
4772017
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ...
Nature protocols 15 (6), 1954-1991, 2020
4062020
Global chemical effects of the microbiome include new bile-acid conjugations
RA Quinn, AV Melnik, A Vrbanac, T Fu, KA Patras, MP Christy, Z Bodai, ...
Nature 579 (7797), 123-129, 2020
3632020
Learning representations of microbe–metabolite interactions
JT Morton, AA Aksenov, LF Nothias, JR Foulds, RA Quinn, MH Badri, ...
Nature methods 16 (12), 1306-1314, 2019
2342019
Global chemical analysis of biology by mass spectrometry
AA Aksenov, R da Silva, R Knight, NP Lopes, PC Dorrestein
Nature Reviews Chemistry 1 (7), 0054, 2017
1962017
Mass spectrometry searches using MASST
M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ...
Nature biotechnology 38 (1), 23-26, 2020
1822020
Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment
R Schmid, D Petras, LF Nothias, M Wang, AT Aron, A Jagels, H Tsugawa, ...
Nature communications 12 (1), 3832, 2021
1542021
The red–ox treatments influence on the structure and properties of M2O3–CeO2–ZrO2 (M= Y, La) solid solutions
LN Ikryannikova, AA Aksenov, GL Markaryan, GP Murav’eva, BG Kostyuk, ...
Applied Catalysis A: General 210 (1-2), 225-235, 2001
1222001
Detection of Huanglongbing disease using differential mobility spectrometry
AA Aksenov, A Pasamontes, DJ Peirano, W Zhao, AM Dandekar, O Fiehn, ...
Analytical chemistry 86 (5), 2481-2488, 2014
1172014
Chemical standards for ion mobility spectrometry: a review
G Kaur-Atwal, G O’Connor, AA Aksenov, V Bocos-Bintintan, ...
International Journal for Ion Mobility Spectrometry 12, 1-14, 2009
1172009
Consumption of fermented foods is associated with systematic differences in the gut microbiome and metabolome
BC Taylor, F Lejzerowicz, M Poirel, JP Shaffer, L Jiang, A Aksenov, ...
Msystems 5 (2), 10.1128/msystems. 00901-19, 2020
1012020
A community resource for paired genomic and metabolomic data mining
MA Schorn, S Verhoeven, L Ridder, F Huber, DD Acharya, AA Aksenov, ...
Nature Chemical Biology 17 (4), 363-368, 2021
1002021
3D molecular cartography using LC–MS facilitated by Optimus and'ili software
I Protsyuk, AV Melnik, LF Nothias, L Rappez, P Phapale, AA Aksenov, ...
Nature protocols 13 (1), 134-154, 2018
992018
Auto-deconvolution and molecular networking of gas chromatography–mass spectrometry data
AA Aksenov, I Laponogov, Z Zhang, SLF Doran, I Belluomo, D Veselkov, ...
Nature biotechnology 39 (2), 169-173, 2021
962021
A Cutibacterium acnes antibiotic modulates human skin microbiota composition in hair follicles
J Claesen, JB Spagnolo, SF Ramos, KL Kurita, AL Byrd, AA Aksenov, ...
Science translational medicine 12 (570), eaay5445, 2020
932020
Cellular scent of influenza virus infection.
AA Aksenov, CE Sandrock, W Zhao, S Sankaran, M Schivo, R Harper, ...
Chembiochem 15 (7), 1040-1048, 2014
912014
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Articles 1–20