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Dmytro Guzenko
Dmytro Guzenko
Verified email at ucsd.edu
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Cited by
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RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology …
SK Burley, C Bhikadiya, C Bi, S Bittrich, L Chen, GV Crichlow, CH Christie, ...
Nucleic acids research 49 (D1), D437-D451, 2021
11082021
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
SK Burley, HM Berman, C Bhikadiya, C Bi, L Chen, L Di Costanzo, ...
Nucleic acids research 47 (D1), D464-D474, 2019
10342019
Protein Data Bank: the single global archive for 3D macromolecular structure data
Nucleic acids research 47 (D1), D520-D528, 2019
6352019
Intermediate filament structure: the bottom-up approach
AA Chernyatina, D Guzenko, SV Strelkov
Current opinion in cell biology 32, 65-72, 2015
1202015
The deubiquitylase USP33 discriminates between RALB functions in autophagy and innate immune response
M Simicek, S Lievens, M Laga, D Guzenko, VN Aushev, P Kalev, ...
Nature cell biology 15 (10), 1220-1230, 2013
1002013
BioJava 5: A community driven open-source bioinformatics library
A Lafita, S Bliven, A Prlić, D Guzenko, PW Rose, A Bradley, P Pavan, ...
PLoS computational biology 15 (2), e1006791, 2019
432019
Real time structural search of the Protein Data Bank
D Guzenko, SK Burley, JM Duarte
PLoS computational biology 16 (7), e1007970, 2020
422020
Crystallographic studies of intermediate filament proteins
D Guzenko, AA Chernyatina, SV Strelkov
Fibrous Proteins: Structures and Mechanisms, 151-170, 2017
422017
Assessment of protein assembly prediction in CASP13
D Guzenko, A Lafita, B Monastyrskyy, A Kryshtafovych, JM Duarte
Proteins: Structure, Function, and Bioinformatics 87 (12), 1190-1199, 2019
382019
CCFold: Rapid And Accurate Prediction Of Coiled-Coil Structures And Application To Modelling Intermediate Filaments
D Guzenko, SV Strelkov
Bioinformatics, btx551, 2017
342017
Lateral A11 type tetramerization in lamins
AV Lilina, AA Chernyatina, D Guzenko, SV Strelkov
Journal of Structural Biology 209 (1), 107404, 2020
332020
powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology …
SK Burley, C Bhikadiya, C Bi, S Bittrich, L Chen, GV Crichlow, CH Christie, ...
Nucleic Acids Res 49, D437-D451, 2021
292021
Small angle X‐ray scattering‐assisted protein structure prediction in CASP13 and emergence of solution structure differences
GL Hura, CD Hodge, D Rosenberg, D Guzenko, JM Duarte, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1298-1314, 2019
292019
How to study intermediate filaments in atomic detail
AA Chernyatina, JF Hess, D Guzenko, JC Voss, SV Strelkov
Methods in enzymology 568, 3-33, 2016
162016
Optimal data-driven parameterization of coiled coils
D Guzenko, SV Strelkov
Journal of Structural Biology 204 (1), 125-129, 2018
32018
Granular clustering of de novo protein models
D Guzenko, SV Strelkov
Bioinformatics 33 (3), 390-396, 2017
22017
RCSB PDB Next-generation Data Delivery and Search Services
C Zardecki, J Duarte, C Bi, C Bhikadiya, S Bittrich, L Chen, D Guzenko, ...
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES 76, A70-A70, 2020
2020
Z-score to evaluate the absolute quality of macromolecular models based on SAXS data
D Guzenko, SV Strelkov
bioRxiv, 349704, 2018
2018
Bioinformatics tools to study intermediate filament structure
D Guzenko
KU Leuven, 2017
2017
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Articles 1–19