Regional isolation drives bacterial diversification within cystic fibrosis lungs P Jorth, BJ Staudinger, X Wu, KB Hisert, H Hayden, J Garudathri, ... Cell host & microbe 18 (3), 307-319, 2015 | 314 | 2015 |
A field guide to federated optimization J Wang, Z Charles, Z Xu, G Joshi, HB McMahan, M Al-Shedivat, G Andrew, ... arXiv preprint arXiv:2107.06917, 2021 | 300 | 2021 |
In Vivo Protein Interaction Network Identified with a Novel Real-Time Cross-Linked Peptide Identification Strategy CR Weisbrod, JD Chavez, JK Eng, L Yang, C Zheng, JE Bruce Journal of proteome research 12 (4), 1569-1579, 2013 | 144 | 2013 |
Protein interactions, post-translational modifications and topologies in human cells JD Chavez, CR Weisbrod, C Zheng, JK Eng, JE Bruce Molecular & Cellular Proteomics 12 (5), 1451-1467, 2013 | 120 | 2013 |
Cross-linking measurements of in vivo protein complex topologies C Zheng, L Yang, MR Hoopmann, JK Eng, X Tang, CR Weisbrod, ... Molecular & Cellular Proteomics 10 (10), 2011 | 106 | 2011 |
In vivo protein interaction network analysis reveals porin-localized antibiotic inactivation in Acinetobacter baumannii strain AB5075 X Wu, JD Chavez, DK Schweppe, C Zheng, CR Weisbrod, JK Eng, ... Nature communications 7 (1), 13414, 2016 | 99 | 2016 |
Quantitative interactome analysis reveals a chemoresistant edgotype JD Chavez, DK Schweppe, JK Eng, C Zheng, A Taipale, Y Zhang, ... Nature communications 6 (1), 7928, 2015 | 93 | 2015 |
In Vivo Identification of the Outer Membrane Protein OmcA−MtrC Interaction Network in Shewanella oneidensis MR-1 Cells Using Novel Hydrophobic Chemical … H Zhang, X Tang, GR Munske, N Zakharova, L Yang, C Zheng, MA Wolff, ... Journal of proteome research 7 (4), 1712-1720, 2008 | 93 | 2008 |
Probing the protein interaction network of Pseudomonas aeruginosa cells by chemical cross-linking mass spectrometry AT Navare, JD Chavez, C Zheng, CR Weisbrod, JK Eng, R Siehnel, ... Structure 23 (4), 762-773, 2015 | 89 | 2015 |
Informatics strategies for large-scale novel cross-linking analysis GA Anderson, N Tolic, X Tang, C Zheng, JE Bruce Journal of proteome research 6 (9), 3412-3421, 2007 | 64 | 2007 |
XLinkDB 2.0: integrated, large-scale structural analysis of protein crosslinking data DK Schweppe, C Zheng, JD Chavez, AT Navare, X Wu, JK Eng, JE Bruce Bioinformatics 32 (17), 2716-2718, 2016 | 55 | 2016 |
XLink-DB: database and software tools for storing and visualizing protein interaction topology data C Zheng, CR Weisbrod, JD Chavez, JK Eng, V Sharma, X Wu, JE Bruce Journal of proteome research 12 (4), 1989-1995, 2013 | 53 | 2013 |
Dynamic proteome response of Pseudomonas aeruginosa to tobramycin antibiotic treatment X Wu, K Held, C Zheng, BJ Staudinger, JD Chavez, CR Weisbrod, JK Eng, ... Molecular & Cellular Proteomics 14 (8), 2126-2137, 2015 | 48 | 2015 |
In Vivo Application of Photocleavable Protein Interaction Reporter Technology L Yang, C Zheng, CR Weisbrod, X Tang, GR Munske, MR Hoopmann, ... Journal of proteome research 11 (2), 1027-1041, 2012 | 35 | 2012 |
Integrating cross-linking experiments with ab initio protein–protein docking T Vreven, DK Schweppe, JD Chavez, CR Weisbrod, S Shibata, C Zheng, ... Journal of molecular biology 430 (12), 1814-1828, 2018 | 29 | 2018 |
Role of the tumor suppressor IQGAP2 in metabolic homeostasis: Possible link between diabetes and cancer B Vaitheesvaran, K Hartil, A Navare, C Zheng, P Ó Broin, A Golden, ... Metabolomics 10, 920-937, 2014 | 28 | 2014 |
Regional isolation drives diversification within cystic fibrosis lungs P Jorth, BJ Staudinger, X Wu, KB Hisert, H Hayden, J Garudathri, ... Pediatric Pulmonology 50, 175-176, 2015 | 2 | 2015 |
Integrating cross-linking experiments withab initioprotein-protein docking T Vreven, DK Schweppe, JD Chavez, CR Weisbrod, S Shibata, C Zheng, ... | | 2018 |
EXPLORING PSEUDOMONAS AERUGINOSA ANTIBIOTIC TREATMENT RESISTANCE THROUGH POPULATION COMPOSITION SHIFTS B Staudinger, X Wu, C Zheng, J Garudathri, L Andersen, C Franz, J Bruce, ... PEDIATRIC PULMONOLOGY 48, 339-339, 2013 | | 2013 |
GENETIC VARIATION IN P. AERUGINOSA PROVIDES CLUES TO CF LUNG DISEASE HETEROGENEITY B Staudinger, C Zheng, AF Goddard, C Fligner, ML Aitken, J Bruce, ... PEDIATRIC PULMONOLOGY 47, 349-349, 2012 | | 2012 |