Jessica Severin
Jessica Severin
Verified email at gsc.riken.jp - Homepage
Title
Cited by
Cited by
Year
Finishing the euchromatic sequence of the human genome
FS Collins, ES Lander, J Rogers, RH Waterston, I Conso
Nature 431 (7011), 931-945, 2004
43322004
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.
International Chicken Genome Sequencing Consortium
Nature 432 (7018), 695-716, 2004
25052004
Ensembl 2007
TJP Hubbard, BL Aken, K Beal, B Ballester, M Cáccamo, Y Chen, ...
Nucleic acids research 35 (suppl_1), D610-D617, 2007
15692007
A conditional knockout resource for the genome-wide study of mouse gene function
WC Skarnes, B Rosen, AP West, M Koutsourakis, W Bushell, V Iyer, ...
Nature 474 (7351), 337-342, 2011
14252011
A promoter-level mammalian expression atlas
Fantom Consortium
Nature 507 (7493), 462, 2014
12532014
EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
AJ Vilella, J Severin, A Ureta-Vidal, L Heng, R Durbin, E Birney
Genome research 19 (2), 327-335, 2009
11052009
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
6802017
Ensembl 2005
T Hubbard, D Andrews, M Cáccamo, G Cameron, Y Chen, M Clamp, ...
Nucleic acids research 33 (suppl_1), D447-D453, 2005
5962005
Gateways to the FANTOM5 promoter level mammalian expression atlas
M Lizio, J Harshbarger, H Shimoji, J Severin, T Kasukawa, S Sahin, ...
Genome biology 16 (1), 1-14, 2015
5512015
Ensembl 2006
E Birney, D Andrews, M Cáccamo, Y Chen, L Clarke, G Coates, T Cox, ...
Nucleic acids research 34 (suppl_1), D556-D561, 2006
4762006
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
4562015
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
ROS Center, FANTOM Consortium
Nature genetics 41 (5), 553, 2009
4412009
An integrated expression atlas of miRNAs and their promoters in human and mouse
D De Rie, I Abugessaisa, T Alam, E Arner, P Arner, H Ashoor, G Åström, ...
Nature biotechnology 35 (9), 872-878, 2017
3112017
Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
C Plessy, N Bertin, H Takahashi, R Simone, M Salimullah, T Lassmann, ...
Nature methods 7 (7), 528-534, 2010
1542010
Interactive visualization and analysis of large-scale sequencing datasets using ZENBU
J Severin, M Lizio, J Harshbarger, H Kawaji, CO Daub, Y Hayashizaki, ...
Nature biotechnology 32 (3), 217-219, 2014
1452014
FANTOM5 CAGE profiles of human and mouse samples
S Noguchi, T Arakawa, S Fukuda, M Furuno, A Hasegawa, F Hori, ...
Scientific data 4 (1), 1-10, 2017
1112017
Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation
H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ...
Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014
1102014
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases
M Lizio, I Abugessaisa, S Noguchi, A Kondo, A Hasegawa, CC Hon, ...
Nucleic acids research 47 (D1), D752-D758, 2019
912019
The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation
H Kawaji, J Severin, M Lizio, A Waterhouse, S Katayama, KM Irvine, ...
Genome biology 10 (4), 1-8, 2009
872009
A Whole-Genome Shotgun Optical Map of Yersinia pestis Strain KIM
S Zhou, W Deng, TS Anantharaman, A Lim, ET Dimalanta, J Wang, T Wu, ...
Applied and environmental microbiology 68 (12), 6321-6331, 2002
842002
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Articles 1–20