Doyle Ward
Title
Cited by
Cited by
Year
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
nature 486 (7402), 207, 2012
72182012
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ...
Genome research 21 (3), 494-504, 2011
25582011
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
XC Morgan, TL Tickle, H Sokol, D Gevers, KL Devaney, DV Ward, ...
Genome biology 13 (9), 1-18, 2012
20452012
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
nature 486 (7402), 215, 2012
17572012
A catalog of reference genomes from the human microbiome
Human Microbiome Jumpstart Reference Strains Consortium, KE Nelson, ...
Science 328 (5981), 994-999, 2010
7282010
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ...
Nature biotechnology 29 (5), 415-420, 2011
5202011
Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung
JD Gawronski, SMS Wong, G Giannoukos, DV Ward, BJ Akerley
Proceedings of the National Academy of Sciences 106 (38), 16422-16427, 2009
3352009
Early empiric antibiotic use in preterm infants is associated with lower bacterial diversity and higher relative abundance of Enterobacter
C Greenwood, AL Morrow, AJ Lagomarcino, M Altaye, DH Taft, Z Yu, ...
The Journal of pediatrics 165 (1), 23-29, 2014
2862014
Strain-level microbial epidemiology and population genomics from shotgun metagenomics
M Scholz, DV Ward, E Pasolli, T Tolio, M Zolfo, F Asnicar, DT Truong, ...
Nature methods 13 (5), 435-438, 2016
2662016
Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease
E Papa, M Docktor, C Smillie, S Weber, SP Preheim, D Gevers, ...
PloS one 7 (6), e39242, 2012
2632012
Early microbial and metabolomic signatures predict later onset of necrotizing enterocolitis in preterm infants
AL Morrow, AJ Lagomarcino, KR Schibler, DH Taft, Z Yu, B Wang, ...
Microbiome 1 (1), 1-16, 2013
2532013
Evaluation of 16S rDNA-based community profiling for human microbiome research
Jumpstart Consortium Human Microbiome Project Data Generation Working Group
PloS one 7 (6), e39315, 2012
2532012
Recovery of ethanol-induced Akkermansia muciniphila depletion ameliorates alcoholic liver disease
C Grander, TE Adolph, V Wieser, P Lowe, L Wrzosek, B Gyongyosi, ...
Gut 67 (5), 891-901, 2018
2522018
Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes
G Giannoukos, DM Ciulla, K Huang, BJ Haas, J Izard, JZ Levin, J Livny, ...
Genome biology 13 (3), 1-13, 2012
2252012
Whole genome characterization of the mechanisms of daptomycin resistance in clinical and laboratory derived isolates of Staphylococcus aureus
AY Peleg, S Miyakis, DV Ward, AM Earl, A Rubio, DR Cameron, S Pillai, ...
PloS one 7 (1), e28316, 2012
1972012
Bifidobacteria exhibit social behavior through carbohydrate resource sharing in the gut
C Milani, GA Lugli, S Duranti, F Turroni, L Mancabelli, C Ferrario, ...
Scientific reports 5 (1), 1-14, 2015
1802015
The success of Acinetobacter species; genetic, metabolic and virulence attributes
AY Peleg, A de Breij, MD Adams, GM Cerqueira, S Mocali, M Galardini, ...
PloS one 7 (10), e46984, 2012
1752012
Peptide linkage mapping of the Agrobacterium tumefaciens vir-encoded type IV secretion system reveals protein subassemblies
DV Ward, O Draper, JR Zupan, PC Zambryski
Proceedings of the National Academy of Sciences 99 (17), 11493-11500, 2002
1742002
Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants
DV Ward, M Scholz, M Zolfo, DH Taft, KR Schibler, A Tett, N Segata, ...
Cell reports 14 (12), 2912-2924, 2016
1282016
Petrosino JF, Knight R, Birren BW. 2011. Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
BJ Haas, D Gevers, AM Earl, M Feldgarden, DV Ward, G Giannoukos, ...
Genome Res 21 (3), 494-504, 0
101
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