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Markus S. Schröder
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survcomp: an R/Bioconductor package for performance assessment and comparison of survival models
MS Schröder, AC Culhane, J Quackenbush, B Haibe-Kains
Bioinformatics 27 (22), 3206-3208, 2011
3372011
Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer
DMA Gendoo, N Ratanasirigulchai, MS Schröder, L Paré, JS Parker, ...
Bioinformatics, btv693, 2015
252*2015
Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin
G Wu, H Zhao, C Li, MP Rajapakse, WC Wong, J Xu, CW Saunders, ...
PLOS Genet 11 (11), e1005614, 2015
1882015
The GenomeAsia 100K Project enables genetic discoveries across Asia
the GenomeAsia100K Consortium
Nature 576 (7785), 106–111, 2019
1572019
GeneSigDB: a manually curated database and resource for analysis of gene expression signatures
AC Culhane, MS Schröder, R Sultana, SC Picard, EN Martinelli, C Kelly, ...
Nucleic Acids Research, gkr901, 2011
1332011
Comparative genome analysis and gene finding in Candida species using CGOB
SL Maguire, SS ÓhÉigeartaigh, KP Byrne, MS Schröder, P O'Gaora, ...
Molecular Biology and Evolution, 2013
1152013
Comparative Phenotypic Analysis of the Major Fungal Pathogens Candida parapsilosis and Candida albicans
LM Holland, MS Schröder, SA Turner, H Taff, D Andes, Z Grózer, ...
PLoS Pathogens 10 (9), e1004365, 2014
1092014
The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins
Nature Genetics 52 (1), 2020
952020
Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species
Markus S. Schröder, Kontxi Martinez de San Vicente, Tâmara H. R. Prandini ...
PLOS Genet 12 (11), e1006404, 2016
592016
Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis
Y Zhu, PG Engström, C Tellgren-Roth, CD Baudo, JC Kennell, S Sun, ...
Nucleic Acids Research, gkx006, 2017
402017
Significance analysis of prognostic signatures
AH Beck, NW Knoblauch, MM Hefti, J Kaplan, SJ Schnitt, AC Culhane, ...
PLoS Comput Biol 9 (1), e1002875, 2013
392013
RamiGO: an R/Bioconductor package providing an AmiGO Visualize interface
MS Schröder, D Gusenleitner, J Quackenbush, AC Culhane, ...
Bioinformatics 29 (5), 666-668, 2013
382013
Controlled Cycling and Quiescence Enables Efficient HDR in Engraftment-Enriched Adult Hematopoietic Stem and Progenitor Cells
JJ Shin, MS Schröder, F Caiado, SK Wyman, NL Bray, M Bordi, MA Dewitt, ...
Cell Reports 32 (9), 108093, 2020
272020
Integrated genomic analysis reveals mutated ELF3 as a potential gallbladder cancer vaccine candidate
A Pandey, EW Stawiski, S Durinck, H Gowda, LD Goldstein, ...
Nature Communications 11 (1), 1-13, 2020
242020
The CgHaa1-Regulon Mediates Response and Tolerance to Acetic Acid Stress in the Human Pathogen Candida glabrata
RT Bernardo, DV Cunha, C Wang, L Pereira, S Silva, SB Salazar, ...
G3: Genes| Genomes| Genetics 7 (1), 1-18, 2017
242017
PnB Designer: a web application to design prime and base editor guide RNAs for animals and plants
SM Siegner, ME Karasu, MS Schröder, Z Kontarakis, JE Corn
BMC bioinformatics 22 (1), 1-12, 2021
152021
Identification of African-Specific Admixture between Modern and Archaic Humans
JD Wall, A Ratan, E Stawiski, the GenomeAsia 100K Consortium
AJHG 105 (6), 1254-1261, 2019
142019
Using RNA-seq for Analysis of Differential Gene Expression in Fungal Species
C Wang, MS Schröder, S Hammel, G Butler
Yeast Functional Genomics: Methods and Protocols, 1-40, 2016
142016
ATF4 Regulates MYB to Increase γ-Globin in Response to Loss of β-Globin
MY Boontanrart, MS Schröder, GM Stehli, M Banović, SK Wyman, RJ Lew, ...
Cell Reports 32 (5), 107993, 2020
11*2020
Effect of progesterone on Candida albicans biofilm formation under acidic conditions: A transcriptomic analysis
B Gonçalves, R Bernardo, C Wang, MS Schröder, NA Pedro, G Butler, ...
International Journal of Medical Microbiology 310 (3), 151414, 2020
112020
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Articles 1–20